EnhancerDB
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  3. rs78145258[chr3:16102539]
Enhancers that have rs78145258[chr3:16102539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 16088245 16123415 enh20381
Liver Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr3 16102393 16102705 vista40124
VISTA
Transcript factors that have rs78145258[chr3:16102539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 16102525 16102542 RARA JASPAR yes 696483
chr3 16102525 16102542 RARA JASPAR yes 70945518
chr3 16102531 16102547 SOX4 JASPAR yes 696484
chr3 16102531 16102547 SOX4 JASPAR yes 70945519
chr3 16102533 16102544 ESRRA JASPAR yes 696485
chr3 16102533 16102544 ESRRB JASPAR yes 696486
chr3 16102533 16102544 ESRRA JASPAR yes 70945520
chr3 16102533 16102544 ESRRB JASPAR yes 70945521
chr3 16102534 16102549 NR2C2 JASPAR yes 696487
chr3 16102534 16102549 NR2C2 JASPAR yes 70945522
chr3 16102535 16102543 NR4A2 JASPAR yes 696488
chr3 16102535 16102543 NR4A2 JASPAR yes 70945523
chr3 16102537 16102541 ESR1 TRANSFAC yes 696489
chr3 16102537 16102541 ESR1 TRANSFAC yes 70945524
Genes associated with rs78145258[chr3:16102539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More