EnhancerDB
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  3. vista40153[chr3:16440818-16441233]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40153[chr3:16440818-16441233]
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Tissue distribution of vista40153
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Transcription factor that possibly regulate vista40153[chr3:16440818-16441233]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16441014 16441442 CTCF UCSC Txn Factor no Conserved 108528464
chr3 16440822 16440828 HiNF-A TRANSFAC yes 722202
chr3 16440822 16440828 HiNF-A TRANSFAC yes 70946560
chr3 16440842 16440847 GATA2 JASPAR yes 722203
chr3 16440842 16440847 GATA2 JASPAR yes 70946561
chr3 16440860 16440870 MNX1 JASPAR yes 722204
chr3 16440860 16440870 MNX1 JASPAR yes 70946562
chr3 16440861 16440869 BARX1 JASPAR yes 722205
chr3 16440861 16440869 BARX1 JASPAR yes 70946563
chr3 16440877 16440895 TP63 JASPAR yes 722206
chr3 16440877 16440895 TP63 JASPAR yes 70946564
chr3 16440879 16440883 YY1 TRANSFAC yes 722207
chr3 16440879 16440883 YY1 TRANSFAC yes 70946565
chr3 16440899 16440911 BHLHE23 JASPAR yes 722208
chr3 16440899 16440911 BHLHE23 JASPAR yes 70946566
chr3 16440900 16440910 OLIG2 JASPAR yes 722209
chr3 16440900 16440910 OLIG3 JASPAR yes 722210
chr3 16440900 16440910 OLIG2 JASPAR yes 70946567
chr3 16440900 16440910 OLIG3 JASPAR yes 70946568
chr3 16440916 16440936 PPARG JASPAR yes 722211
chr3 16440916 16440936 PPARG JASPAR yes 70946569
chr3 16440924 16440938 ATF7 JASPAR yes 722212
chr3 16440924 16440938 ATF7 JASPAR yes 70946570
chr3 16440925 16440937 JDP2 JASPAR yes 722213
chr3 16440925 16440937 JDP2 JASPAR yes 70946571
chr3 16440930 16440945 RFX5 JASPAR yes 722214
chr3 16440930 16440945 RFX5 JASPAR yes 70946572
chr3 16440948 16440958 MSC JASPAR yes 722215
chr3 16440948 16440958 MSC JASPAR yes 70946573
chr3 16440963 16440967 YY1 TRANSFAC yes 722216
chr3 16440963 16440967 YY1 TRANSFAC yes 70946574
chr3 16440995 16440998 MYB TRANSFAC yes 722217
chr3 16440995 16440998 MYB TRANSFAC yes 70946575
chr3 16441015 16441030 NR2C2 JASPAR yes 722218
chr3 16441015 16441030 NR2C2 JASPAR yes 70946576
chr3 16441018 16441039 ZNF263 JASPAR yes 722219
chr3 16441018 16441039 ZNF263 JASPAR yes 70946577
chr3 16441022 16441043 ZNF263 JASPAR yes 722220
chr3 16441022 16441043 ZNF263 JASPAR yes 70946578
chr3 16441041 16441059 MAFF JASPAR yes 722221
chr3 16441041 16441059 MAFF JASPAR yes 70946579
chr3 16441042 16441057 MAFK JASPAR yes 722222
chr3 16441042 16441057 MAFK JASPAR yes 70946580
chr3 16441046 16441057 NRL JASPAR yes 722223
chr3 16441046 16441057 NRL JASPAR yes 70946581
chr3 16441049 16441069 ESR1 JASPAR yes 722224
chr3 16441049 16441069 ESR1 JASPAR yes 70946582
chr3 16441053 16441070 ESR1 JASPAR yes 722225
chr3 16441053 16441070 ESR1 JASPAR yes 70946583
chr3 16441053 16441071 ESR2 JASPAR yes 722226
chr3 16441053 16441071 ESR2 JASPAR yes 70946584
chr3 16441054 16441069 ESR2 JASPAR yes 722227
chr3 16441054 16441069 ESR2 JASPAR yes 70946585
chr3 16441076 16441090 SPIC JASPAR yes 722228
chr3 16441076 16441090 SPIC JASPAR yes 70946586
chr3 16441077 16441098 IRF1 JASPAR yes 722229
chr3 16441077 16441098 IRF1 JASPAR yes 70946587
chr3 16441079 16441094 PRDM1 JASPAR yes 722230
chr3 16441079 16441094 STAT2 JASPAR yes 722231
chr3 16441079 16441094 PRDM1 JASPAR yes 70946588
chr3 16441079 16441094 STAT2 JASPAR yes 70946589
chr3 16441102 16441115 NFKB1 JASPAR yes 722232
chr3 16441102 16441115 NFKB1 JASPAR yes 70946590
chr3 16441103 16441113 RELA JASPAR yes 722233
chr3 16441103 16441113 RELA JASPAR yes 70946591
chr3 16441103 16441114 NFKB1 JASPAR yes 722234
chr3 16441103 16441114 NFKB1 JASPAR yes 70946592
chr3 16441104 16441114 NFKB1 JASPAR yes 722235
chr3 16441104 16441114 RELA JASPAR yes 722236
chr3 16441104 16441114 REL JASPAR yes 722237
chr3 16441104 16441114 NFKB1 JASPAR yes 70946593
chr3 16441104 16441114 RELA JASPAR yes 70946594
chr3 16441104 16441114 REL JASPAR yes 70946595
chr3 16441107 16441121 EBF1 JASPAR yes 722238
chr3 16441107 16441121 EBF1 JASPAR yes 70946596
chr3 16441108 16441119 EBF1 JASPAR yes 722239
chr3 16441108 16441119 EBF1 JASPAR yes 70946597
chr3 16441121 16441133 TFAP2A JASPAR yes 722240
chr3 16441121 16441133 TFAP2B JASPAR yes 722241
chr3 16441121 16441133 TFAP2C JASPAR yes 722242
chr3 16441121 16441133 TFAP2A JASPAR yes 70946598
chr3 16441121 16441133 TFAP2B JASPAR yes 70946599
chr3 16441121 16441133 TFAP2C JASPAR yes 70946600
chr3 16441121 16441136 TFAP2A JASPAR yes 722243
chr3 16441121 16441136 TFAP2C JASPAR yes 722244
chr3 16441121 16441136 TFAP2A JASPAR yes 70946601
chr3 16441121 16441136 TFAP2C JASPAR yes 70946602
chr3 16441134 16441155 ZNF263 JASPAR yes 722245
chr3 16441134 16441155 ZNF263 JASPAR yes 70946603
chr3 16441136 16441141 ETS2 TRANSFAC yes 722246
chr3 16441136 16441141 ETS2 TRANSFAC yes 70946604
chr3 16441137 16441150 EOMES JASPAR yes 722247
chr3 16441137 16441150 EOMES JASPAR yes 70946605
chr3 16441139 16441149 TBR1 JASPAR yes 722248
chr3 16441139 16441149 TBR1 JASPAR yes 70946606
chr3 16441139 16441150 TBX20 JASPAR yes 722249
chr3 16441139 16441150 TBX2 JASPAR yes 722250
chr3 16441139 16441150 TBX20 JASPAR yes 70946607
chr3 16441139 16441150 TBX2 JASPAR yes 70946608
chr3 16441139 16441160 ZNF263 JASPAR yes 722251
chr3 16441139 16441160 ZNF263 JASPAR yes 70946609
chr3 16441140 16441150 TBX21 JASPAR yes 722252
chr3 16441140 16441150 TBX21 JASPAR yes 70946610
chr3 16441141 16441149 MGA JASPAR yes 722253
chr3 16441141 16441149 TBX15 JASPAR yes 722254
chr3 16441141 16441149 TBX1 JASPAR yes 722255
chr3 16441141 16441149 TBX4 JASPAR yes 722256
chr3 16441141 16441149 TBX5 JASPAR yes 722257
chr3 16441141 16441149 MGA JASPAR yes 70946611
chr3 16441141 16441149 TBX15 JASPAR yes 70946612
chr3 16441141 16441149 TBX1 JASPAR yes 70946613
chr3 16441141 16441149 TBX4 JASPAR yes 70946614
chr3 16441141 16441149 TBX5 JASPAR yes 70946615
chr3 16441150 16441156 SP1 TRANSFAC yes 722258
chr3 16441150 16441156 SP1 TRANSFAC yes 70946616
chr3 16441150 16441160 SP1 JASPAR yes 722259
chr3 16441150 16441160 SP1 JASPAR yes 70946617
chr3 16441155 16441163 EHF JASPAR yes 722260
chr3 16441155 16441163 EHF JASPAR yes 70946618
chr3 16441165 16441182 PAX1 JASPAR yes 722261
chr3 16441165 16441182 PAX9 JASPAR yes 722262
chr3 16441165 16441182 PAX1 JASPAR yes 70946619
chr3 16441165 16441182 PAX9 JASPAR yes 70946620
chr3 16441166 16441171 H4TF1 TRANSFAC yes 722263
chr3 16441166 16441171 H4TF1 TRANSFAC yes 70946621
chr3 16441180 16441201 IRF1 JASPAR yes 722264
chr3 16441180 16441201 IRF1 JASPAR yes 70946622
chr3 16441182 16441197 STAT2 JASPAR yes 722265
chr3 16441182 16441197 STAT2 JASPAR yes 70946623
chr3 16441183 16441197 STAT1 JASPAR yes 722266
chr3 16441183 16441197 STAT1 JASPAR yes 70946624
chr3 16441184 16441199 IRF9 JASPAR yes 722267
chr3 16441184 16441199 IRF9 JASPAR yes 70946625
chr3 16441199 16441208 THAP1 JASPAR yes 722268
chr3 16441199 16441208 THAP1 JASPAR yes 70946626
chr3 16441199 16441218 CTCF JASPAR yes 722269
chr3 16441199 16441218 CTCF JASPAR yes 70946627
chr3 16441220 16441239 REST JASPAR yes 722270
chr3 16441220 16441239 REST JASPAR yes 70946628
chr3 16441223 16441242 REST JASPAR yes 722271
chr3 16441223 16441242 REST JASPAR yes 70946629
SNP sites on vista40153[chr3:16440818-16441233]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16441008 rs193162672 C T no 6581372
chr3 16441080 rs576728942 TTAC T
CTCF IRF1 PRDM1 SPIC STAT2
6581373
chr3 16441167 rs62236333 G A,T
CTCF H4TF1 PAX1 PAX9
6581374
chr3 16441178 rs713352 T C
CTCF PAX1 PAX9
6581375
Genes possibly regulated by vista40153[chr3:16440818-16441233]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista40153[chr3:16440818-16441233]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results