EnhancerDB
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  3. rs576728942[chr3:16441080]
Enhancers that have rs576728942[chr3:16441080]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 16422468 16448575 enh7030
Skin (Keratinocyte) Kidney Epithelial (MCF-7) Brain (SK-N-SH) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Breast Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Thymus Heart
chr3 16440818 16441233 vista40153
VISTA
Transcript factors that have rs576728942[chr3:16441080]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 16441014 16441442 CTCF UCSC Txn Factor no Conserved 108528464
chr3 16441076 16441090 SPIC JASPAR yes 722228
chr3 16441076 16441090 SPIC JASPAR yes 70946586
chr3 16441077 16441098 IRF1 JASPAR yes 722229
chr3 16441077 16441098 IRF1 JASPAR yes 70946587
chr3 16441079 16441094 PRDM1 JASPAR yes 722230
chr3 16441079 16441094 STAT2 JASPAR yes 722231
chr3 16441079 16441094 PRDM1 JASPAR yes 70946588
chr3 16441079 16441094 STAT2 JASPAR yes 70946589
Genes associated with rs576728942[chr3:16441080], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More