Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region



Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528470
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528471
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528472
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528473
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528474
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528475
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528476
chr3 16549013 16549025 E2F8 JASPAR yes 735875
chr3 16549013 16549025 E2F8 JASPAR yes 70946887
chr3 16549029 16549043 NR2F1 JASPAR yes 735876
chr3 16549029 16549043 NR2F1 JASPAR yes 70946888
chr3 16549040 16549057 ZNF410 JASPAR yes 735877
chr3 16549040 16549057 ZNF410 JASPAR yes 70946889
chr3 16549045 16549055 HOXB13 JASPAR yes 735878
chr3 16549045 16549055 HOXB13 JASPAR yes 70946890
chr3 16549067 16549082 HNF4G JASPAR yes 735879
chr3 16549067 16549082 HNF4G JASPAR yes 70946891
chr3 16549072 16549078 SOX10 JASPAR yes 735880
chr3 16549072 16549078 SOX10 JASPAR yes 70946892
chr3 16549098 16549109 CEBPA JASPAR yes 735881
chr3 16549098 16549109 CEBPA JASPAR yes 70946893
chr3 16549103 16549123 RREB1 JASPAR yes 735882
chr3 16549103 16549123 RREB1 JASPAR yes 70946894
chr3 16549104 16549110 HiNF-A TRANSFAC yes 735883
chr3 16549104 16549110 HiNF-A TRANSFAC yes 70946895
chr3 16549105 16549125 RREB1 JASPAR yes 735884
chr3 16549105 16549125 RREB1 JASPAR yes 70946896
chr3 16549107 16549127 RREB1 JASPAR yes 735885
chr3 16549107 16549127 RREB1 JASPAR yes 70946897
chr3 16549109 16549129 RREB1 JASPAR yes 735886
chr3 16549109 16549129 RREB1 JASPAR yes 70946898
chr3 16549113 16549133 RREB1 JASPAR yes 735887
chr3 16549113 16549133 RREB1 JASPAR yes 70946899
chr3 16549148 16549154 ZNF354C JASPAR yes 735888
chr3 16549148 16549154 ZNF354C JASPAR yes 70946900
chr3 16549150 16549162 FOXI1 JASPAR yes 735889
chr3 16549150 16549162 FOXI1 JASPAR yes 70946901
chr3 16549171 16549187 ZNF143 JASPAR yes 735890
chr3 16549171 16549187 ZNF143 JASPAR yes 70946902
chr3 16549180 16549194 FOXF2 JASPAR yes 735891
chr3 16549180 16549194 FOXF2 JASPAR yes 70946903
chr3 16549183 16549195 FOXI1 JASPAR yes 735892
chr3 16549183 16549195 FOXI1 JASPAR yes 70946904
chr3 16549185 16549193 FOXG1 JASPAR yes 735893
chr3 16549185 16549193 FOXG1 JASPAR yes 70946905
chr3 16549187 16549193 HiNF-A TRANSFAC yes 735894
chr3 16549187 16549193 HiNF-A TRANSFAC yes 70946906
chr3 16549229 16549241 FOXI1 JASPAR yes 735895
chr3 16549229 16549241 FOXI1 JASPAR yes 70946907
chr3 16549233 16549239 HiNF-A TRANSFAC yes 735896
chr3 16549233 16549239 HiNF-A TRANSFAC yes 70946908
chr3 16549266 16549286 RREB1 JASPAR yes 735897
chr3 16549266 16549286 RREB1 JASPAR yes 70946909
chr3 16549267 16549279 FOXI1 JASPAR yes 735898
chr3 16549267 16549279 FOXI1 JASPAR yes 70946910
chr3 16549271 16549277 HiNF-A TRANSFAC yes 735899
chr3 16549271 16549277 HiNF-A TRANSFAC yes 70946911
chr3 16549294 16549314 RREB1 JASPAR yes 735900
chr3 16549294 16549314 RREB1 JASPAR yes 70946912
chr3 16549295 16549307 FOXI1 JASPAR yes 735901
chr3 16549295 16549307 FOXI1 JASPAR yes 70946913

chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16549042 rs141880140 C T 6582472
chr3 16549126 rs35258603 C CACACACAT,CACACAT,CAT 6582473
chr3 16549128 rs78623763 C T 6582474
chr3 16549160 rs146495544 C T 6582475
chr3 16549170 rs531283545 TAC T
6582476
chr3 16549231 rs115607078 C T 6582477
chr3 16549256 rs575260679 A G
6582478
chr3 16549258 rs551442917 ACT A
6582479
chr3 16549258 rs57998160 ACT A
6582480
chr3 16549285 rs79179204 C A 6582481

Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16355081 16555533 - RFTN1 ENSG00000131378.9 16555533 0.73 0.99 3452 93765


Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More

No results