EnhancerDB
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  3. vista40164[chr3:16552919-16553213]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40164[chr3:16552919-16553213]
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Tissue distribution of vista40164
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Transcription factor that possibly regulate vista40164[chr3:16552919-16553213]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528470
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528471
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528472
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528473
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528474
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528475
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528476
chr3 16552932 16552938 YY1 JASPAR yes 736465
chr3 16552932 16552938 YY1 JASPAR yes 70947125
chr3 16552942 16552954 INSM1 JASPAR yes 736466
chr3 16552942 16552954 INSM1 JASPAR yes 70947126
chr3 16552942 16552962 RREB1 JASPAR yes 736467
chr3 16552942 16552962 RREB1 JASPAR yes 70947127
chr3 16552951 16552962 TBX20 JASPAR yes 736468
chr3 16552951 16552962 TBX20 JASPAR yes 70947128
chr3 16552952 16552960 TBX5 JASPAR yes 736469
chr3 16552952 16552960 TBX5 JASPAR yes 70947129
chr3 16552968 16552980 YY1 JASPAR yes 736470
chr3 16552968 16552980 YY1 JASPAR yes 70947130
chr3 16552971 16552977 YY1 JASPAR yes 736471
chr3 16552971 16552977 YY1 JASPAR yes 70947131
chr3 16552995 16553006 TBX20 JASPAR yes 736472
chr3 16552995 16553006 TBX20 JASPAR yes 70947132
chr3 16552996 16553004 TBX5 JASPAR yes 736473
chr3 16552996 16553004 TBX5 JASPAR yes 70947133
chr3 16553005 16553009 YY1 TRANSFAC yes 736474
chr3 16553005 16553009 YY1 TRANSFAC yes 70947134
chr3 16553008 16553020 ZBTB7B JASPAR yes 736475
chr3 16553008 16553020 ZBTB7B JASPAR yes 70947135
chr3 16553014 16553018 ESR1 TRANSFAC yes 736476
chr3 16553014 16553018 ESR1 TRANSFAC yes 70947136
chr3 16553044 16553050 TBP TRANSFAC yes 736477
chr3 16553044 16553050 TBP TRANSFAC yes 70947137
chr3 16553056 16553061 TFAP2A TRANSFAC yes 736478
chr3 16553056 16553061 TFAP2A TRANSFAC yes 70947138
chr3 16553056 16553062 MZF1 JASPAR yes 736479
chr3 16553056 16553062 MZF1 JASPAR yes 70947139
chr3 16553059 16553064 GATA2 JASPAR yes 736480
chr3 16553059 16553064 GATA2 JASPAR yes 70947140
chr3 16553059 16553079 ESR1 JASPAR yes 736481
chr3 16553059 16553079 ESR1 JASPAR yes 70947141
chr3 16553062 16553080 ESR2 JASPAR yes 736482
chr3 16553062 16553080 ESR2 JASPAR yes 70947142
chr3 16553064 16553079 ESR2 JASPAR yes 736483
chr3 16553064 16553079 ESR2 JASPAR yes 70947143
chr3 16553064 16553084 ESR1 JASPAR yes 736484
chr3 16553064 16553084 ESR1 JASPAR yes 70947144
chr3 16553065 16553080 AR JASPAR yes 736485
chr3 16553065 16553080 AR JASPAR yes 70947145
chr3 16553102 16553112 NFIA JASPAR yes 736486
chr3 16553102 16553112 NFIA JASPAR yes 70947146
chr3 16553104 16553110 NFIC JASPAR yes 736487
chr3 16553104 16553110 NFIC JASPAR yes 70947147
chr3 16553108 16553126 ESR2 JASPAR yes 736488
chr3 16553108 16553126 ESR2 JASPAR yes 70947148
chr3 16553114 16553124 SP1 JASPAR yes 736489
chr3 16553114 16553124 SP1 JASPAR yes 70947149
chr3 16553133 16553145 ZBTB7A JASPAR yes 736490
chr3 16553133 16553145 ZBTB7A JASPAR yes 70947150
chr3 16553134 16553146 GLI2 JASPAR yes 736491
chr3 16553134 16553146 GLI2 JASPAR yes 70947151
chr3 16553142 16553157 STAT2 JASPAR yes 736492
chr3 16553142 16553157 STAT2 JASPAR yes 70947152
chr3 16553143 16553157 STAT1 JASPAR yes 736493
chr3 16553143 16553157 STAT1 JASPAR yes 70947153
chr3 16553144 16553156 IRF1 JASPAR yes 736494
chr3 16553144 16553156 IRF1 JASPAR yes 70947154
chr3 16553144 16553159 IRF9 JASPAR yes 736495
chr3 16553144 16553159 IRF9 JASPAR yes 70947155
chr3 16553151 16553166 MAFK JASPAR yes 736496
chr3 16553151 16553166 MAFK JASPAR yes 70947156
chr3 16553187 16553204 BCL6B JASPAR yes 736497
chr3 16553187 16553204 BCL6B JASPAR yes 70947157
chr3 16553188 16553203 STAT1 JASPAR yes 736498
chr3 16553188 16553203 STAT1 JASPAR yes 70947158
chr3 16553190 16553201 STAT1 JASPAR yes 736499
chr3 16553190 16553201 STAT1 JASPAR yes 70947159
chr3 16553200 16553210 SREBF1 JASPAR yes 736500
chr3 16553200 16553210 SREBF1 JASPAR yes 70947160
chr3 16553213 16553219 NFIC JASPAR yes 736501
chr3 16553213 16553219 NFIC JASPAR yes 70947161
SNP sites on vista40164[chr3:16552919-16553213]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16553146 rs1346604 G C
GLI2 IRF1 IRF9 POLR2A STAT1 STAT2
6582544
Genes possibly regulated by vista40164[chr3:16552919-16553213]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16355081 16555533 - RFTN1 ENSG00000131378.9 16555533 0.73 0.99 3452 97680
Expression level of Genes
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miRNAs possibly regulated by vista40164[chr3:16552919-16553213]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results