EnhancerDB
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  3. vista40165[chr3:16556249-16556592]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40165[chr3:16556249-16556592]
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Tissue distribution of vista40165
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Transcription factor that possibly regulate vista40165[chr3:16556249-16556592]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528470
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528471
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528472
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528473
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528474
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528475
chr3 16548942 16558839 POLR2A UCSC Txn Factor no Conserved 108528476
chr3 16556250 16556255 SP1 TRANSFAC yes 70947162
chr3 16556273 16556277 H4TF2 TRANSFAC yes 70947163
chr3 16556290 16556293 MYB TRANSFAC yes 70947164
chr3 16556309 16556314 ETS2 TRANSFAC yes 70947165
chr3 16556319 16556323 YY1 TRANSFAC yes 70947166
chr3 16556319 16556333 IRF7 JASPAR yes 70947167
chr3 16556321 16556327 TCF4 TRANSFAC yes 70947168
chr3 16556321 16556336 FOXP1 JASPAR yes 70947169
chr3 16556322 16556331 SRY JASPAR yes 70947170
chr3 16556322 16556333 FOXP2 JASPAR yes 70947171
chr3 16556324 16556332 FOXO3 JASPAR yes 70947172
chr3 16556336 16556346 GABPA JASPAR yes 70947173
chr3 16556336 16556347 ELF5 JASPAR yes 70947174
chr3 16556336 16556349 ELF1 JASPAR yes 70947175
chr3 16556343 16556359 RFX4 JASPAR yes 70947176
chr3 16556367 16556381 SPI1 JASPAR yes 70947177
chr3 16556367 16556381 SPIC JASPAR yes 70947178
chr3 16556370 16556375 ETS2 TRANSFAC yes 70947179
chr3 16556372 16556393 IRF1 JASPAR yes 70947180
chr3 16556374 16556389 PRDM1 JASPAR yes 70947181
chr3 16556374 16556389 STAT2 JASPAR yes 70947182
chr3 16556375 16556379 YY1 TRANSFAC yes 70947183
chr3 16556375 16556389 SPIC JASPAR yes 70947184
chr3 16556375 16556389 STAT1 JASPAR yes 70947185
chr3 16556376 16556390 IRF7 JASPAR yes 70947186
chr3 16556376 16556390 IRF8 JASPAR yes 70947187
chr3 16556376 16556391 IRF9 JASPAR yes 70947188
chr3 16556382 16556392 NFATC3 JASPAR yes 70947189
chr3 16556404 16556425 ZNF263 JASPAR yes 70947190
chr3 16556410 16556431 ZNF263 JASPAR yes 70947191
chr3 16556412 16556422 MZF1 JASPAR yes 70947192
chr3 16556415 16556421 SP1 TRANSFAC yes 70947193
chr3 16556415 16556425 SP1 JASPAR yes 70947194
chr3 16556426 16556447 IRF1 JASPAR yes 70947195
chr3 16556430 16556442 IRF1 JASPAR yes 70947196
chr3 16556430 16556445 IRF9 JASPAR yes 70947197
chr3 16556430 16556450 RREB1 JASPAR yes 70947198
chr3 16556432 16556438 TCF4 TRANSFAC yes 70947199
chr3 16556432 16556447 FOXP1 JASPAR yes 70947200
chr3 16556433 16556444 FOXP2 JASPAR yes 70947201
chr3 16556433 16556445 FOXC2 JASPAR yes 70947202
chr3 16556434 16556449 FOXP1 JASPAR yes 70947203
chr3 16556437 16556447 HOXB13 JASPAR yes 70947204
chr3 16556438 16556450 FOXI1 JASPAR yes 70947205
chr3 16556439 16556451 FOXC2 JASPAR yes 70947206
chr3 16556441 16556445 YY1 TRANSFAC yes 70947207
chr3 16556442 16556457 FOXP1 JASPAR yes 70947208
chr3 16556449 16556467 IRF2 JASPAR yes 70947209
chr3 16556449 16556470 ZNF263 JASPAR yes 70947210
chr3 16556450 16556471 IRF1 JASPAR yes 70947211
chr3 16556452 16556467 PRDM1 JASPAR yes 70947212
chr3 16556452 16556467 STAT2 JASPAR yes 70947213
chr3 16556452 16556473 ZNF263 JASPAR yes 70947214
chr3 16556457 16556478 ZNF263 JASPAR yes 70947215
chr3 16556474 16556487 ELF1 JASPAR yes 70947216
chr3 16556501 16556505 NFE TRANSFAC yes 70947217
chr3 16556502 16556507 GATA2 JASPAR yes 70947218
chr3 16556504 16556510 MZF1 JASPAR yes 70947219
chr3 16556505 16556519 PLAG1 JASPAR yes 70947220
chr3 16556512 16556523 YY2 JASPAR yes 70947221
chr3 16556515 16556529 PLAG1 JASPAR yes 70947222
chr3 16556518 16556522 YY1 TRANSFAC yes 70947223
chr3 16556519 16556533 E2F7 JASPAR yes 70947224
chr3 16556520 16556532 E2F8 JASPAR yes 70947225
chr3 16556522 16556532 MZF1 JASPAR yes 70947226
chr3 16556530 16556539 NKX2-8 JASPAR yes 70947227
chr3 16556543 16556557 TCF7L2 JASPAR yes 70947228
chr3 16556543 16556558 LEF1 JASPAR yes 70947229
chr3 16556547 16556553 TCF4 TRANSFAC yes 70947230
chr3 16556548 16556569 IRF1 JASPAR yes 70947231
chr3 16556550 16556561 FOXC1 JASPAR yes 70947232
chr3 16556562 16556573 USF1 JASPAR yes 70947233
chr3 16556562 16556573 USF2 JASPAR yes 70947234
SNP sites on vista40165[chr3:16556249-16556592]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16556533 rs73146271 A G
E2F7 NKX2-8 POLR2A
6582591
Genes possibly regulated by vista40165[chr3:16556249-16556592]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16355081 16555533 - RFTN1 ENSG00000131378.9 16555533 0.73 0.99 3452 99284
Expression level of Genes
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miRNAs possibly regulated by vista40165[chr3:16556249-16556592]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results