EnhancerDB
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  3. vista4039[chr1:178550500-178550885]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4039[chr1:178550500-178550885]
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Tissue distribution of vista4039
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Transcription factor that possibly regulate vista4039[chr1:178550500-178550885]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 178550442 178550746 RUNX3 UCSC Txn Factor no Conserved 107847415
chr1 178550502 178550759 POU2F2 UCSC Txn Factor no Conserved 107847419
chr1 178550576 178550728 SPI1 UCSC Txn Factor no Conserved 107847424
chr1 178550539 178550553 NR2F1 JASPAR yes 33425828
chr1 178550539 178550553 NR2F1 JASPAR yes 118405500
chr1 178550545 178550554 ZEB1 JASPAR yes 33425829
chr1 178550545 178550554 ZEB1 JASPAR yes 118405501
chr1 178550546 178550556 FIGLA JASPAR yes 33425830
chr1 178550546 178550556 ID4 JASPAR yes 33425831
chr1 178550546 178550556 TCF3 JASPAR yes 33425832
chr1 178550546 178550556 TCF4 JASPAR yes 33425833
chr1 178550546 178550556 FIGLA JASPAR yes 118405502
chr1 178550546 178550556 ID4 JASPAR yes 118405503
chr1 178550546 178550556 TCF3 JASPAR yes 118405504
chr1 178550546 178550556 TCF4 JASPAR yes 118405505
chr1 178550548 178550553 USF2 TRANSFAC yes 33425834
chr1 178550548 178550553 USF2 TRANSFAC yes 118405506
chr1 178550569 178550572 MYB TRANSFAC yes 33425835
chr1 178550569 178550572 MYB TRANSFAC yes 118405507
chr1 178550586 178550598 BHLHE23 JASPAR yes 33425836
chr1 178550586 178550598 BHLHE23 JASPAR yes 118405508
chr1 178550587 178550597 BHLHE22 JASPAR yes 33425837
chr1 178550587 178550597 BHLHE22 JASPAR yes 118405509
chr1 178550589 178550601 POU2F1 JASPAR yes 33425838
chr1 178550589 178550601 POU2F1 JASPAR yes 118405510
chr1 178550590 178550602 POU3F1 JASPAR yes 33425839
chr1 178550590 178550602 POU3F2 JASPAR yes 33425840
chr1 178550590 178550602 POU3F1 JASPAR yes 118405511
chr1 178550590 178550602 POU3F2 JASPAR yes 118405512
chr1 178550590 178550603 POU2F2 JASPAR yes 33425841
chr1 178550590 178550603 POU2F2 JASPAR yes 118405513
chr1 178550591 178550600 POU3F4 JASPAR yes 33425842
chr1 178550591 178550600 POU5F1B JASPAR yes 33425843
chr1 178550591 178550600 POU3F4 JASPAR yes 118405514
chr1 178550591 178550600 POU5F1B JASPAR yes 118405515
chr1 178550611 178550617 NFE2 TRANSFAC yes 33425844
chr1 178550611 178550617 NFE2 TRANSFAC yes 118405516
chr1 178550639 178550660 ZNF263 JASPAR yes 33425845
chr1 178550639 178550660 ZNF263 JASPAR yes 118405517
chr1 178550641 178550654 POU2F2 JASPAR yes 33425846
chr1 178550641 178550654 POU2F2 JASPAR yes 118405518
chr1 178550654 178550664 ID4 JASPAR yes 33425847
chr1 178550654 178550664 TCF3 JASPAR yes 33425848
chr1 178550654 178550664 TCF4 JASPAR yes 33425849
chr1 178550654 178550664 ID4 JASPAR yes 118405519
chr1 178550654 178550664 TCF3 JASPAR yes 118405520
chr1 178550654 178550664 TCF4 JASPAR yes 118405521
chr1 178550655 178550664 SNAI2 JASPAR yes 33425850
chr1 178550655 178550664 SNAI2 JASPAR yes 118405522
chr1 178550655 178550668 SCRT2 JASPAR yes 33425851
chr1 178550655 178550668 SCRT2 JASPAR yes 118405523
chr1 178550656 178550661 USF2 TRANSFAC yes 33425852
chr1 178550656 178550661 USF2 TRANSFAC yes 118405524
chr1 178550664 178550677 POU2F2 JASPAR yes 33425853
chr1 178550664 178550677 POU2F2 JASPAR yes 118405525
chr1 178550665 178550677 POU3F1 JASPAR yes 33425854
chr1 178550665 178550677 POU3F1 JASPAR yes 118405526
chr1 178550665 178550678 POU3F3 JASPAR yes 33425855
chr1 178550665 178550678 POU3F3 JASPAR yes 118405527
chr1 178550666 178550670 YY1 TRANSFAC yes 33425856
chr1 178550666 178550670 YY1 TRANSFAC yes 118405528
chr1 178550666 178550678 POU2F1 JASPAR yes 33425857
chr1 178550666 178550678 POU2F1 JASPAR yes 118405529
chr1 178550667 178550674 POU2F1 TRANSFAC yes 33425858
chr1 178550667 178550674 POU2F2C TRANSFAC yes 33425859
chr1 178550667 178550674 POU2F2 TRANSFAC yes 33425860
chr1 178550667 178550674 POU2F1 TRANSFAC yes 118405530
chr1 178550667 178550674 POU2F2C TRANSFAC yes 118405531
chr1 178550667 178550674 POU2F2 TRANSFAC yes 118405532
chr1 178550667 178550676 POU3F4 JASPAR yes 33425861
chr1 178550667 178550676 POU5F1B JASPAR yes 33425862
chr1 178550667 178550676 POU3F4 JASPAR yes 118405533
chr1 178550667 178550676 POU5F1B JASPAR yes 118405534
chr1 178550734 178550739 ETS2 TRANSFAC yes 33425863
chr1 178550734 178550739 ETS2 TRANSFAC yes 118405535
chr1 178550739 178550755 RFX2 JASPAR yes 33425864
chr1 178550739 178550755 RFX3 JASPAR yes 33425865
chr1 178550739 178550755 RFX5 JASPAR yes 33425866
chr1 178550739 178550755 RFX2 JASPAR yes 118405536
chr1 178550739 178550755 RFX3 JASPAR yes 118405537
chr1 178550739 178550755 RFX5 JASPAR yes 118405538
chr1 178550740 178550754 EBF1 JASPAR yes 33425867
chr1 178550740 178550754 EBF1 JASPAR yes 118405539
chr1 178550741 178550752 EBF1 JASPAR yes 33425868
chr1 178550741 178550752 EBF1 JASPAR yes 118405540
chr1 178550742 178550753 EBF1 JASPAR yes 33425869
chr1 178550742 178550753 EBF1 JASPAR yes 118405541
chr1 178550742 178550757 RFX5 JASPAR yes 33425870
chr1 178550742 178550757 RFX5 JASPAR yes 118405542
chr1 178550758 178550769 E2F6 JASPAR yes 33425871
chr1 178550758 178550769 E2F6 JASPAR yes 118405543
chr1 178550759 178550780 ZNF263 JASPAR yes 33425872
chr1 178550759 178550780 ZNF263 JASPAR yes 118405544
chr1 178550765 178550780 NR2C2 JASPAR yes 33425873
chr1 178550765 178550780 NR2C2 JASPAR yes 118405545
chr1 178550766 178550772 SP1 TRANSFAC yes 33425874
chr1 178550766 178550772 SP1 TRANSFAC yes 118405546
chr1 178550766 178550776 SP1 JASPAR yes 33425875
chr1 178550766 178550776 ZNF740 JASPAR yes 33425876
chr1 178550766 178550776 SP1 JASPAR yes 118405547
chr1 178550766 178550776 ZNF740 JASPAR yes 118405548
chr1 178550767 178550778 E2F6 JASPAR yes 33425877
chr1 178550767 178550778 E2F6 JASPAR yes 118405549
chr1 178550801 178550805 YY1 TRANSFAC yes 33425878
chr1 178550801 178550805 YY1 TRANSFAC yes 118405550
chr1 178550807 178550822 TFAP2A JASPAR yes 33425879
chr1 178550807 178550822 TFAP2A JASPAR yes 118405551
chr1 178550813 178550825 ZBTB7B JASPAR yes 33425880
chr1 178550813 178550825 ZBTB7C JASPAR yes 33425881
chr1 178550813 178550825 ZBTB7B JASPAR yes 118405552
chr1 178550813 178550825 ZBTB7C JASPAR yes 118405553
chr1 178550814 178550826 ZBTB7A JASPAR yes 33425882
chr1 178550814 178550826 ZBTB7A JASPAR yes 118405554
chr1 178550816 178550821 SP1 TRANSFAC yes 33425883
chr1 178550816 178550821 SP1 TRANSFAC yes 118405555
chr1 178550817 178550832 RFX5 JASPAR yes 33425884
chr1 178550817 178550832 RFX5 JASPAR yes 118405556
chr1 178550876 178550896 ESR1 JASPAR yes 33425885
chr1 178550876 178550896 ESR1 JASPAR yes 118405557
SNP sites on vista4039[chr1:178550500-178550885]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 178550615 rs148337722 C G
NFE2 POU2F2 RUNX3 SPI1
754822
chr1 178550656 rs374708570 G A
ID4 POU2F2 RUNX3 SCRT2 SNAI2 SPI1 TCF3 TCF4 USF2 ZNF263
754823
chr1 178550869 rs568418170 C T no 754824
chr1 178550884 rs117509755 C T
ESR1
754825
Genes possibly regulated by vista4039[chr1:178550500-178550885]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 178482212 178517734 + TEX35 ENSG00000240021.5 178482212 0.92 0.85 1599 31712
chr1 178511887 178518024 + C1orf220 ENSG00000213057.4 178511887 0.85 0.95 1600 61387
chr1 178511950 178517579 + C1ORF220 ENSG00000184909.8 178511950 0.95 0.99 1601 61450
Expression level of Genes
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miRNAs possibly regulated by vista4039[chr1:178550500-178550885]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results