EnhancerDB
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  3. rs374708570[chr1:178550656]
Enhancers that have rs374708570[chr1:178550656]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178528505 178560595 enh755
Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9) Heart
chr1 178550500 178550885 vista4039
VISTA
Transcript factors that have rs374708570[chr1:178550656]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178550142 178550812 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107847408
chr1 178550320 178550916 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21352610
chr1 178550320 178550916 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107847409
chr1 178550344 178550864 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21352611
chr1 178550344 178550864 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107847410
chr1 178550405 178550795 ZBTB33 GTRD no Lung (A549) 107847411
chr1 178550427 178550723 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21352612
chr1 178550427 178550723 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107847412
chr1 178550438 178550758 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21352613
chr1 178550438 178550758 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107847413
chr1 178550441 178550731 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21352614
chr1 178550441 178550731 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107847414
chr1 178550442 178550746 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21352615
chr1 178550442 178550746 RUNX3 UCSC Txn Factor no Conserved 107847415
chr1 178550442 178550746 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107847416
chr1 178550466 178550770 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21352616
chr1 178550466 178550770 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107847417
chr1 178550482 178550792 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21352617
chr1 178550482 178550792 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107847418
chr1 178550502 178550759 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21352618
chr1 178550502 178550759 POU2F2 UCSC Txn Factor no Conserved 107847419
chr1 178550502 178550759 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107847420
chr1 178550502 178550762 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107847421
chr1 178550561 178550664 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21352619
chr1 178550561 178550664 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107847422
chr1 178550568 178550898 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107847423
chr1 178550576 178550728 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21352620
chr1 178550576 178550728 SPI1 UCSC Txn Factor no Conserved 107847424
chr1 178550576 178550728 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107847425
chr1 178550603 178550853 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107847426
chr1 178550639 178550660 ZNF263 JASPAR yes 33425845
chr1 178550639 178550660 ZNF263 JASPAR yes 118405517
chr1 178550651 178550760 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21352621
chr1 178550651 178550760 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107847427
chr1 178550654 178550664 ID4 JASPAR yes 33425847
chr1 178550654 178550664 TCF3 JASPAR yes 33425848
chr1 178550654 178550664 TCF4 JASPAR yes 33425849
chr1 178550654 178550664 ID4 JASPAR yes 118405519
chr1 178550654 178550664 TCF3 JASPAR yes 118405520
chr1 178550654 178550664 TCF4 JASPAR yes 118405521
chr1 178550655 178550664 SNAI2 JASPAR yes 33425850
chr1 178550655 178550664 SNAI2 JASPAR yes 118405522
chr1 178550655 178550668 SCRT2 JASPAR yes 33425851
chr1 178550655 178550668 SCRT2 JASPAR yes 118405523
chr1 178550656 178550661 USF2 TRANSFAC yes 33425852
chr1 178550656 178550661 USF2 TRANSFAC yes 118405524
Genes associated with rs374708570[chr1:178550656], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More