EnhancerDB
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  3. vista4055[chr1:179279883-179280253]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4055[chr1:179279883-179280253]
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Tissue distribution of vista4055
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Transcription factor that possibly regulate vista4055[chr1:179279883-179280253]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 179279921 179280163 FOS UCSC Txn Factor no Conserved 107847598
chr1 179279873 179279884 FOXP2 JASPAR yes 33479393
chr1 179279873 179279884 FOXP2 JASPAR yes 118406235
chr1 179279875 179279884 SRY JASPAR yes 33479394
chr1 179279875 179279884 SRY JASPAR yes 118406236
chr1 179279898 179279912 STAT1 JASPAR yes 33479395
chr1 179279898 179279912 STAT1 JASPAR yes 118406237
chr1 179279899 179279911 IRF1 JASPAR yes 33479396
chr1 179279899 179279911 IRF1 JASPAR yes 118406238
chr1 179279905 179279920 STAT1 JASPAR yes 33479397
chr1 179279905 179279920 STAT1 JASPAR yes 118406239
chr1 179279912 179279923 CDX2 JASPAR yes 33479398
chr1 179279912 179279923 CDX2 JASPAR yes 118406240
chr1 179279913 179279924 HOXA10 JASPAR yes 33479399
chr1 179279913 179279924 HOXA10 JASPAR yes 118406241
chr1 179279914 179279923 CDX1 JASPAR yes 33479400
chr1 179279914 179279923 CDX1 JASPAR yes 118406242
chr1 179279914 179279924 HOXA13 JASPAR yes 33479401
chr1 179279914 179279924 HOXB13 JASPAR yes 33479402
chr1 179279914 179279924 HOXA13 JASPAR yes 118406243
chr1 179279914 179279924 HOXB13 JASPAR yes 118406244
chr1 179279956 179279969 SCRT2 JASPAR yes 33479403
chr1 179279956 179279969 SCRT2 JASPAR yes 118406245
chr1 179279956 179279971 SCRT1 JASPAR yes 33479404
chr1 179279956 179279971 SCRT1 JASPAR yes 118406246
chr1 179279979 179279983 YY1 TRANSFAC yes 33479405
chr1 179279979 179279983 YY1 TRANSFAC yes 118406247
chr1 179279981 179279993 MEF2A JASPAR yes 33479406
chr1 179279981 179279993 MEF2A JASPAR yes 118406248
chr1 179280013 179280024 FOSL1 JASPAR yes 33479407
chr1 179280013 179280024 JUND JASPAR yes 33479408
chr1 179280013 179280024 FOSL1 JASPAR yes 118406249
chr1 179280013 179280024 JUND JASPAR yes 118406250
chr1 179280014 179280025 FOSL2 JASPAR yes 33479409
chr1 179280014 179280025 JUNB JASPAR yes 33479410
chr1 179280014 179280025 FOSL2 JASPAR yes 118406251
chr1 179280014 179280025 JUNB JASPAR yes 118406252
chr1 179280014 179280028 JUN JASPAR yes 33479411
chr1 179280014 179280028 JUN JASPAR yes 118406253
chr1 179280018 179280034 SOX8 JASPAR yes 33479412
chr1 179280018 179280034 SOX8 JASPAR yes 118406254
chr1 179280029 179280050 MAFG JASPAR yes 33479413
chr1 179280029 179280050 MAFG JASPAR yes 118406255
chr1 179280032 179280037 ETS2 TRANSFAC yes 33479414
chr1 179280032 179280037 ETS2 TRANSFAC yes 118406256
chr1 179280034 179280045 FOSL1 JASPAR yes 33479415
chr1 179280034 179280045 FOSL1 JASPAR yes 118406257
chr1 179280034 179280052 MAFF JASPAR yes 33479416
chr1 179280034 179280052 MAFF JASPAR yes 118406258
chr1 179280035 179280046 FOSL2 JASPAR yes 33479417
chr1 179280035 179280046 JUNB JASPAR yes 33479418
chr1 179280035 179280046 FOSL2 JASPAR yes 118406259
chr1 179280035 179280046 JUNB JASPAR yes 118406260
chr1 179280035 179280049 JUN JASPAR yes 33479419
chr1 179280035 179280049 JUN JASPAR yes 118406261
chr1 179280035 179280050 MAFK JASPAR yes 33479420
chr1 179280035 179280050 MAFK JASPAR yes 118406262
chr1 179280036 179280047 BATF JASPAR yes 33479421
chr1 179280036 179280047 BATF JASPAR yes 118406263
chr1 179280043 179280054 HOXC13 JASPAR yes 33479422
chr1 179280043 179280054 HOXC13 JASPAR yes 118406264
chr1 179280071 179280075 NFE TRANSFAC yes 33479423
chr1 179280071 179280075 NFE TRANSFAC yes 118406265
chr1 179280071 179280092 IRF1 JASPAR yes 33479424
chr1 179280071 179280092 IRF1 JASPAR yes 118406266
chr1 179280076 179280091 FOXP1 JASPAR yes 33479425
chr1 179280076 179280091 FOXP1 JASPAR yes 118406267
chr1 179280077 179280092 FOXP1 JASPAR yes 33479426
chr1 179280077 179280092 FOXP1 JASPAR yes 118406268
chr1 179280087 179280104 PAX1 JASPAR yes 33479427
chr1 179280087 179280104 PAX1 JASPAR yes 118406269
chr1 179280098 179280112 NR2F1 JASPAR yes 33479428
chr1 179280098 179280112 NR2F1 JASPAR yes 118406270
chr1 179280103 179280116 NR2F1 JASPAR yes 33479429
chr1 179280103 179280116 NR2F1 JASPAR yes 118406271
chr1 179280107 179280111 ESR1 TRANSFAC yes 33479430
chr1 179280107 179280111 ESR1 TRANSFAC yes 118406272
chr1 179280121 179280126 H4TF1 TRANSFAC yes 33479431
chr1 179280121 179280126 H4TF1 TRANSFAC yes 118406273
chr1 179280136 179280151 HNF1A JASPAR yes 33479432
chr1 179280136 179280151 HNF1A JASPAR yes 118406274
chr1 179280137 179280149 HNF1B JASPAR yes 33479433
chr1 179280137 179280149 HNF1B JASPAR yes 118406275
chr1 179280137 179280150 HNF1B JASPAR yes 33479434
chr1 179280137 179280150 HNF1B JASPAR yes 118406276
chr1 179280138 179280145 NKX3-1 JASPAR yes 33479435
chr1 179280138 179280145 NKX3-1 JASPAR yes 118406277
chr1 179280138 179280154 NFYA JASPAR yes 33479436
chr1 179280138 179280154 NFYA JASPAR yes 118406278
chr1 179280141 179280156 NFYB JASPAR yes 33479437
chr1 179280141 179280156 NFYB JASPAR yes 118406279
chr1 179280145 179280159 TLX1 JASPAR yes 33479438
chr1 179280145 179280159 TLX1 JASPAR yes 118406280
chr1 179280148 179280158 TFEB JASPAR yes 33479439
chr1 179280148 179280158 TFEC JASPAR yes 33479440
chr1 179280148 179280158 TFEB JASPAR yes 118406281
chr1 179280148 179280158 TFEC JASPAR yes 118406282
chr1 179280148 179280159 USF1 JASPAR yes 33479441
chr1 179280148 179280159 USF2 JASPAR yes 33479442
chr1 179280148 179280159 USF1 JASPAR yes 118406283
chr1 179280148 179280159 USF2 JASPAR yes 118406284
chr1 179280149 179280159 MAX JASPAR yes 33479443
chr1 179280149 179280159 MAX JASPAR yes 118406285
chr1 179280159 179280176 NR3C1 JASPAR yes 33479444
chr1 179280159 179280176 NR3C2 JASPAR yes 33479445
chr1 179280159 179280176 NR3C1 JASPAR yes 118406286
chr1 179280159 179280176 NR3C2 JASPAR yes 118406287
chr1 179280163 179280175 TAL1 JASPAR yes 33479446
chr1 179280163 179280175 TAL1 JASPAR yes 118406288
chr1 179280180 179280201 IRF1 JASPAR yes 33479447
chr1 179280180 179280201 IRF1 JASPAR yes 118406289
chr1 179280184 179280198 IRF8 JASPAR yes 33479448
chr1 179280184 179280198 IRF8 JASPAR yes 118406290
chr1 179280188 179280203 STAT2 JASPAR yes 33479449
chr1 179280188 179280203 STAT2 JASPAR yes 118406291
chr1 179280189 179280203 STAT1 JASPAR yes 33479450
chr1 179280189 179280203 STAT1 JASPAR yes 118406292
chr1 179280191 179280206 FOXP1 JASPAR yes 33479451
chr1 179280191 179280206 FOXP1 JASPAR yes 118406293
chr1 179280195 179280210 MEF2C JASPAR yes 33479452
chr1 179280195 179280210 MEF2C JASPAR yes 118406294
chr1 179280198 179280202 YY1 TRANSFAC yes 33479453
chr1 179280198 179280202 YY1 TRANSFAC yes 118406295
chr1 179280199 179280214 MEF2C JASPAR yes 33479454
chr1 179280199 179280214 MEF2C JASPAR yes 118406296
chr1 179280200 179280215 MEF2A JASPAR yes 33479455
chr1 179280200 179280215 MEF2A JASPAR yes 118406297
chr1 179280201 179280213 MEF2A JASPAR yes 33479456
chr1 179280201 179280213 MEF2B JASPAR yes 33479457
chr1 179280201 179280213 MEF2D JASPAR yes 33479458
chr1 179280201 179280213 MEF2A JASPAR yes 118406298
chr1 179280201 179280213 MEF2B JASPAR yes 118406299
chr1 179280201 179280213 MEF2D JASPAR yes 118406300
chr1 179280202 179280212 MEF2A JASPAR yes 33479459
chr1 179280202 179280212 MEF2A JASPAR yes 118406301
chr1 179280210 179280216 HiNF-A TRANSFAC yes 33479460
chr1 179280210 179280216 HiNF-A TRANSFAC yes 118406302
chr1 179280210 179280225 JUND JASPAR yes 33479461
chr1 179280210 179280225 JUND JASPAR yes 118406303
chr1 179280211 179280224 JUN JASPAR yes 33479462
chr1 179280211 179280224 JUN JASPAR yes 118406304
chr1 179280217 179280230 ZBTB18 JASPAR yes 33479463
chr1 179280217 179280230 ZBTB18 JASPAR yes 118406305
chr1 179280227 179280238 FOSL2 JASPAR yes 33479464
chr1 179280227 179280238 FOSL2 JASPAR yes 118406306
chr1 179280241 179280245 TEAD2 TRANSFAC yes 33479465
chr1 179280241 179280245 TEAD2 TRANSFAC yes 118406307
chr1 179280242 179280250 RHOXF1 JASPAR yes 33479466
chr1 179280242 179280250 RHOXF1 JASPAR yes 118406308
SNP sites on vista4055[chr1:179279883-179280253]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 179279982 rs1475799 T C
FOS MEF2A YY1
759900
chr1 179280023 rs1475798 C T
FOS FOSL1 FOSL2 JUN JUNB JUND SOX8
759901
chr1 179280086 rs189508702 T C
FOS FOXP1 IRF1
759902
chr1 179280151 rs146852705 C T
FOS HNF1A MAX NFYA NFYB TFEB TFEC TLX1 USF1 USF2
759903
Genes possibly regulated by vista4055[chr1:179279883-179280253]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 179068462 179198819 - ABL2 ENSG00000143322.15 179198819 0.87 0.99 1606 18936
chr1 179262925 179327815 + SOAT1 ENSG00000057252.8 179262925 0.86 0.99 1607 83042
chr1 179334855 179523870 + AXDND1 ENSG00000162779.16 179334855 0.99 1.0 1608 45398
Expression level of Genes
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miRNAs possibly regulated by vista4055[chr1:179279883-179280253]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results