EnhancerDB
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  3. rs189508702[chr1:179280086]
Enhancers that have rs189508702[chr1:179280086]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 179277545 179282471 enh27289
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Muscle (Myoblast) Pancreas Muscle (Myotube)
chr1 179279883 179280253 vista4055
VISTA
Transcript factors that have rs189508702[chr1:179280086]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 179279241 179280234 ZNF143 GTRD no Epithelial (MCF-7) 107847587
chr1 179279253 179280209 ZNF143 GTRD no Epithelial (MCF-7) 107847588
chr1 179279306 179280231 ZNF143 GTRD no Epithelial (MCF-7) 107847589
chr1 179279392 179280109 ZNF143 GTRD no Epithelial (MCF-7) 107847590
chr1 179279491 179280094 ZNF143 GTRD no Epithelial (MCF-7) 107847596
chr1 179279860 179280270 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107847597
chr1 179279921 179280163 FOS UCSC Txn Factor no Conserved 107847598
chr1 179279971 179280255 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107847599
chr1 179280071 179280092 IRF1 JASPAR yes 33479424
chr1 179280071 179280092 IRF1 JASPAR yes 118406266
chr1 179280076 179280091 FOXP1 JASPAR yes 33479425
chr1 179280076 179280091 FOXP1 JASPAR yes 118406267
chr1 179280077 179280092 FOXP1 JASPAR yes 33479426
chr1 179280077 179280092 FOXP1 JASPAR yes 118406268
Genes associated with rs189508702[chr1:179280086], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More