EnhancerDB
  1. Home
  2. Enhancers
  3. vista4072[chr1:180251899-180252130]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4072[chr1:180251899-180252130]
Back to top
Tissue distribution of vista4072
Back to top
Transcription factor that possibly regulate vista4072[chr1:180251899-180252130]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 180251900 180251906 TBP TRANSFAC yes 118406847
chr1 180251914 180251925 DMRT3 JASPAR yes 118406848
chr1 180251918 180251921 MYB TRANSFAC yes 118406849
chr1 180251921 180251925 YY1 TRANSFAC yes 118406850
chr1 180251933 180251943 ALX3 JASPAR yes 118406851
chr1 180251933 180251943 GSX2 JASPAR yes 118406852
chr1 180251933 180251943 MIXL1 JASPAR yes 118406853
chr1 180251934 180251942 ISX JASPAR yes 118406854
chr1 180251934 180251942 LHX9 JASPAR yes 118406855
chr1 180251934 180251942 LMX1B JASPAR yes 118406856
chr1 180251934 180251942 PRRX1 JASPAR yes 118406857
chr1 180251934 180251942 RAX2 JASPAR yes 118406858
chr1 180251934 180251942 SHOX JASPAR yes 118406859
chr1 180251934 180251942 UNCX JASPAR yes 118406860
chr1 180251956 180251962 ZNF354C JASPAR yes 118406861
chr1 180251959 180251968 NFIX JASPAR yes 118406862
chr1 180251961 180251967 NFIC JASPAR yes 118406863
chr1 180251984 180251988 YY1 TRANSFAC yes 118406864
chr1 180251987 180251990 MYB TRANSFAC yes 118406865
chr1 180251988 180252009 IRF1 JASPAR yes 118406866
chr1 180251992 180252006 IRF8 JASPAR yes 118406867
chr1 180251992 180252007 IRF9 JASPAR yes 118406868
chr1 180252011 180252027 ZNF143 JASPAR yes 118406869
chr1 180252077 180252092 FOXP1 JASPAR yes 118406870
chr1 180252079 180252091 FOXC2 JASPAR yes 118406871
chr1 180252080 180252091 FOXP2 JASPAR yes 118406872
chr1 180252080 180252094 ONECUT3 JASPAR yes 118406873
chr1 180252081 180252085 TEAD2 TRANSFAC yes 118406874
chr1 180252081 180252086 TBP TRANSFAC yes 118406875
chr1 180252082 180252090 FOXG1 JASPAR yes 118406876
chr1 180252082 180252090 FOXO3 JASPAR yes 118406877
chr1 180252082 180252091 SRY JASPAR yes 118406878
chr1 180252091 180252101 NEUROG2 JASPAR yes 118406879
chr1 180252095 180252116 IRF1 JASPAR yes 118406880
chr1 180252097 180252112 STAT2 JASPAR yes 118406881
chr1 180252098 180252112 SPIC JASPAR yes 118406882
chr1 180252098 180252112 STAT1 JASPAR yes 118406883
chr1 180252099 180252114 IRF9 JASPAR yes 118406884
chr1 180252101 180252122 IRF1 JASPAR yes 118406885
chr1 180252102 180252117 FOXP1 JASPAR yes 118406886
chr1 180252102 180252123 IRF1 JASPAR yes 118406887
chr1 180252103 180252114 FOXP2 JASPAR yes 118406888
chr1 180252103 180252118 STAT2 JASPAR yes 118406889
chr1 180252103 180252124 IRF1 JASPAR yes 118406890
chr1 180252104 180252119 FOXP1 JASPAR yes 118406891
chr1 180252104 180252125 IRF1 JASPAR yes 118406892
chr1 180252105 180252126 IRF1 JASPAR yes 118406893
chr1 180252106 180252121 FOXP1 JASPAR yes 118406894
chr1 180252106 180252127 IRF1 JASPAR yes 118406895
chr1 180252107 180252122 FOXP1 JASPAR yes 118406896
chr1 180252107 180252128 IRF1 JASPAR yes 118406897
chr1 180252108 180252123 FOXP1 JASPAR yes 118406898
chr1 180252108 180252129 IRF1 JASPAR yes 118406899
chr1 180252109 180252124 FOXP1 JASPAR yes 118406900
chr1 180252110 180252125 FOXP1 JASPAR yes 118406901
chr1 180252111 180252126 FOXP1 JASPAR yes 118406902
chr1 180252112 180252127 FOXP1 JASPAR yes 118406903
chr1 180252113 180252128 FOXP1 JASPAR yes 118406904
chr1 180252114 180252129 FOXP1 JASPAR yes 118406905
chr1 180252115 180252130 FOXP1 JASPAR yes 118406906
SNP sites on vista4072[chr1:180251899-180252130]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 180251938 rs568778242 A G
ALX3 GSX2 ISX LHX9 LMX1B MIXL1 PRRX1 RAX2 SHOX UNCX
763260
chr1 180251967 rs151205413 A G
NFIC NFIX
763261
chr1 180251983 rs12058853 C A,T no 763262
chr1 180252107 rs560248824 GTTTTTTTTT G
FOXP1 FOXP2 IRF1 IRF9 SPIC STAT1 STAT2
763263
Genes possibly regulated by vista4072[chr1:180251899-180252130]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 180199421 180249380 + LHX4 ENSG00000121454.4 180199421 0.79 0.99 1618 47522
Expression level of Genes
Back to top
miRNAs possibly regulated by vista4072[chr1:180251899-180252130]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results