EnhancerDB
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  3. rs568778242[chr1:180251938]
Enhancers that have rs568778242[chr1:180251938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180251899 180252130 vista4072
VISTA
Transcript factors that have rs568778242[chr1:180251938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180250818 180253564 ZNF143 GTRD no Epithelial (MCF-7) 107847787
chr1 180250818 180253564 ZNF143 GTRD no Epithelial (MCF-7) 107847788
chr1 180251037 180253467 ZNF143 GTRD no Epithelial (MCF-7) 107847793
chr1 180251571 180253632 ZBTB33 GTRD no Lung (A549) 107847794
chr1 180251693 180253133 ZNF143 GTRD no Epithelial (MCF-7) 107847795
chr1 180251713 180252430 TCF7L2 GTRD no Colon (HCT116) 107847796
chr1 180251754 180253532 ZNF143 GTRD no Epithelial (MCF-7) 107847797
chr1 180251872 180253158 ZNF274 GTRD no Bone Marrow (K562) 107847798
chr1 180251920 180253323 ZNF143 GTRD no Epithelial (MCF-7) 107847799
chr1 180251933 180251943 ALX3 JASPAR yes 118406851
chr1 180251933 180251943 GSX2 JASPAR yes 118406852
chr1 180251933 180251943 MIXL1 JASPAR yes 118406853
chr1 180251934 180251942 ISX JASPAR yes 118406854
chr1 180251934 180251942 LHX9 JASPAR yes 118406855
chr1 180251934 180251942 LMX1B JASPAR yes 118406856
chr1 180251934 180251942 PRRX1 JASPAR yes 118406857
chr1 180251934 180251942 RAX2 JASPAR yes 118406858
chr1 180251934 180251942 SHOX JASPAR yes 118406859
chr1 180251934 180251942 UNCX JASPAR yes 118406860
Genes associated with rs568778242[chr1:180251938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More