EnhancerDB
  1. Home
  2. Enhancers
  3. vista41047[chr3:55654086-55654842]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41047[chr3:55654086-55654842]
Back to top
Tissue distribution of vista41047
Back to top
Transcription factor that possibly regulate vista41047[chr3:55654086-55654842]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 55654356 55654536 SPI1 UCSC Txn Factor no Conserved 108529319
chr3 55654082 55654096 RXRB JASPAR yes 2532198
chr3 55654082 55654096 RXRG JASPAR yes 2532199
chr3 55654082 55654096 RXRB JASPAR yes 70987967
chr3 55654082 55654096 RXRG JASPAR yes 70987968
chr3 55654083 55654097 TCF7L2 JASPAR yes 2532200
chr3 55654083 55654097 TCF7L2 JASPAR yes 70987969
chr3 55654104 55654114 GSC2 JASPAR yes 2532201
chr3 55654104 55654114 GSC JASPAR yes 2532202
chr3 55654104 55654114 GSC2 JASPAR yes 70987970
chr3 55654104 55654114 GSC JASPAR yes 70987971
chr3 55654105 55654113 OTX1 JASPAR yes 2532203
chr3 55654105 55654113 OTX2 JASPAR yes 2532204
chr3 55654105 55654113 RHOXF1 JASPAR yes 2532205
chr3 55654105 55654113 OTX1 JASPAR yes 70987972
chr3 55654105 55654113 OTX2 JASPAR yes 70987973
chr3 55654105 55654113 RHOXF1 JASPAR yes 70987974
chr3 55654105 55654114 PITX3 JASPAR yes 2532206
chr3 55654105 55654114 PITX3 JASPAR yes 70987975
chr3 55654114 55654128 TLX1 JASPAR yes 2532207
chr3 55654114 55654128 TLX1 JASPAR yes 70987976
chr3 55654115 55654130 FOXA1 JASPAR yes 2532208
chr3 55654115 55654130 FOXA1 JASPAR yes 70987977
chr3 55654119 55654130 FOXA1 JASPAR yes 2532209
chr3 55654119 55654130 FOXA1 JASPAR yes 70987978
chr3 55654129 55654136 JUN TRANSFAC yes 2532210
chr3 55654129 55654136 JUN TRANSFAC yes 70987979
chr3 55654162 55654177 TFAP2C JASPAR yes 2532211
chr3 55654162 55654177 TFAP2C JASPAR yes 70987980
chr3 55654164 55654178 EBF1 JASPAR yes 2532212
chr3 55654164 55654178 EBF1 JASPAR yes 70987981
chr3 55654164 55654179 TFAP2A JASPAR yes 2532213
chr3 55654164 55654179 TFAP2A JASPAR yes 70987982
chr3 55654166 55654172 MZF1 JASPAR yes 2532214
chr3 55654166 55654172 MZF1 JASPAR yes 70987983
chr3 55654177 55654187 RORA JASPAR yes 2532215
chr3 55654177 55654187 RORA JASPAR yes 70987984
chr3 55654186 55654196 CUX1 JASPAR yes 2532216
chr3 55654186 55654196 CUX2 JASPAR yes 2532217
chr3 55654186 55654196 CUX1 JASPAR yes 70987985
chr3 55654186 55654196 CUX2 JASPAR yes 70987986
chr3 55654193 55654200 JUN TRANSFAC yes 2532218
chr3 55654193 55654200 JUN TRANSFAC yes 70987987
chr3 55654220 55654226 MYC TRANSFAC yes 2532219
chr3 55654220 55654226 MYC TRANSFAC yes 70987988
chr3 55654246 55654257 DUX4 JASPAR yes 2532220
chr3 55654246 55654257 DUX4 JASPAR yes 70987989
chr3 55654247 55654252 NFY TRANSFAC yes 2532221
chr3 55654247 55654252 NFY TRANSFAC yes 70987990
chr3 55654253 55654259 LEF1 TRANSFAC yes 2532222
chr3 55654253 55654259 SOX10 JASPAR yes 2532223
chr3 55654253 55654259 LEF1 TRANSFAC yes 70987991
chr3 55654253 55654259 SOX10 JASPAR yes 70987992
chr3 55654263 55654277 IRF7 JASPAR yes 2532224
chr3 55654263 55654277 IRF7 JASPAR yes 70987993
chr3 55654301 55654307 YY1 JASPAR yes 2532225
chr3 55654301 55654307 YY1 JASPAR yes 70987994
chr3 55654305 55654311 MZF1 JASPAR yes 2532226
chr3 55654305 55654311 MZF1 JASPAR yes 70987995
chr3 55654309 55654320 HOXA10 JASPAR yes 2532227
chr3 55654309 55654320 HOXA10 JASPAR yes 70987996
chr3 55654310 55654319 CDX1 JASPAR yes 2532228
chr3 55654310 55654319 CDX1 JASPAR yes 70987997
chr3 55654310 55654320 HOXA13 JASPAR yes 2532229
chr3 55654310 55654320 HOXB13 JASPAR yes 2532230
chr3 55654310 55654320 HOXD13 JASPAR yes 2532231
chr3 55654310 55654320 HOXA13 JASPAR yes 70987998
chr3 55654310 55654320 HOXB13 JASPAR yes 70987999
chr3 55654310 55654320 HOXD13 JASPAR yes 70988000
chr3 55654318 55654331 ELF1 JASPAR yes 2532232
chr3 55654318 55654331 ELF1 JASPAR yes 70988001
chr3 55654321 55654332 FLI1 JASPAR yes 2532233
chr3 55654321 55654332 FLI1 JASPAR yes 70988002
chr3 55654322 55654330 FEV JASPAR yes 2532234
chr3 55654322 55654330 FEV JASPAR yes 70988003
chr3 55654323 55654337 JUN JASPAR yes 2532235
chr3 55654323 55654337 JUN JASPAR yes 70988004
chr3 55654325 55654336 BATF JASPAR yes 2532236
chr3 55654325 55654336 DUX4 JASPAR yes 2532237
chr3 55654325 55654336 BATF JASPAR yes 70988005
chr3 55654325 55654336 DUX4 JASPAR yes 70988006
chr3 55654327 55654338 FOS JASPAR yes 2532238
chr3 55654327 55654338 FOSL1 JASPAR yes 2532239
chr3 55654327 55654338 JUND JASPAR yes 2532240
chr3 55654327 55654338 NFE2 JASPAR yes 2532241
chr3 55654327 55654338 FOS JASPAR yes 70988007
chr3 55654327 55654338 FOSL1 JASPAR yes 70988008
chr3 55654327 55654338 JUND JASPAR yes 70988009
chr3 55654327 55654338 NFE2 JASPAR yes 70988010
chr3 55654328 55654336 JUND TRANSFAC yes 2532242
chr3 55654328 55654336 JUND TRANSFAC yes 70988011
chr3 55654328 55654337 JDP2 JASPAR yes 2532243
chr3 55654328 55654337 JDP2 JASPAR yes 70988012
chr3 55654328 55654339 JUNB JASPAR yes 2532244
chr3 55654328 55654339 JUNB JASPAR yes 70988013
chr3 55654328 55654342 JUN JASPAR yes 2532245
chr3 55654328 55654342 JUN JASPAR yes 70988014
chr3 55654329 55654335 JUN TRANSFAC yes 2532246
chr3 55654329 55654335 JUN TRANSFAC yes 70988015
chr3 55654336 55654340 YY1 TRANSFAC yes 2532247
chr3 55654336 55654340 YY1 TRANSFAC yes 70988016
chr3 55654353 55654364 NFKB1 JASPAR yes 2532248
chr3 55654353 55654364 NFKB1 JASPAR yes 70988017
chr3 55654366 55654369 MYB TRANSFAC yes 2532249
chr3 55654366 55654369 MYB TRANSFAC yes 70988018
chr3 55654366 55654380 TCF7L2 JASPAR yes 2532250
chr3 55654366 55654380 TCF7L2 JASPAR yes 70988019
chr3 55654373 55654389 SOX8 JASPAR yes 2532251
chr3 55654373 55654389 SOX8 JASPAR yes 70988020
chr3 55654397 55654401 TEAD2 TRANSFAC yes 2532252
chr3 55654397 55654401 TEAD2 TRANSFAC yes 70988021
chr3 55654397 55654402 TBP TRANSFAC yes 2532253
chr3 55654397 55654402 TBP TRANSFAC yes 70988022
chr3 55654418 55654432 TCF7L2 JASPAR yes 2532254
chr3 55654418 55654432 TCF7L2 JASPAR yes 70988023
chr3 55654420 55654432 IRF1 JASPAR yes 2532255
chr3 55654420 55654432 IRF1 JASPAR yes 70988024
chr3 55654422 55654443 IRF1 JASPAR yes 2532256
chr3 55654422 55654443 IRF1 JASPAR yes 70988025
chr3 55654424 55654439 STAT2 JASPAR yes 2532257
chr3 55654424 55654439 STAT2 JASPAR yes 70988026
chr3 55654425 55654439 STAT1 JASPAR yes 2532258
chr3 55654425 55654439 STAT1 JASPAR yes 70988027
chr3 55654431 55654444 ELF1 JASPAR yes 2532259
chr3 55654431 55654444 ELF1 JASPAR yes 70988028
chr3 55654431 55654445 SPI1 JASPAR yes 2532260
chr3 55654431 55654445 SPI1 JASPAR yes 70988029
chr3 55654437 55654447 EN2 JASPAR yes 2532261
chr3 55654437 55654447 EN2 JASPAR yes 70988030
chr3 55654441 55654456 RUNX2 JASPAR yes 2532262
chr3 55654441 55654456 RUNX2 JASPAR yes 70988031
chr3 55654442 55654453 RUNX1 JASPAR yes 2532263
chr3 55654442 55654453 RUNX1 JASPAR yes 70988032
chr3 55654508 55654529 MAFG JASPAR yes 2532264
chr3 55654508 55654529 MAFG JASPAR yes 70988033
chr3 55654514 55654525 NFE2L2 JASPAR yes 2532265
chr3 55654514 55654525 NFE2L2 JASPAR yes 70988034
chr3 55654523 55654533 TEAD4 JASPAR yes 2532266
chr3 55654523 55654533 TEAD4 JASPAR yes 70988035
chr3 55654523 55654535 TEAD1 JASPAR yes 2532267
chr3 55654523 55654535 TEAD1 JASPAR yes 70988036
chr3 55654524 55654532 TEAD3 JASPAR yes 2532268
chr3 55654524 55654532 TEAD3 JASPAR yes 70988037
chr3 55654540 55654554 FOXF2 JASPAR yes 2532269
chr3 55654540 55654554 FOXF2 JASPAR yes 70988038
chr3 55654545 55654553 FOXG1 JASPAR yes 2532270
chr3 55654545 55654553 FOXG1 JASPAR yes 70988039
chr3 55654547 55654553 HiNF-A TRANSFAC yes 2532271
chr3 55654547 55654553 HiNF-A TRANSFAC yes 70988040
chr3 55654562 55654576 RXRG JASPAR yes 2532272
chr3 55654562 55654576 RXRG JASPAR yes 70988041
chr3 55654562 55654577 NR2C2 JASPAR yes 2532273
chr3 55654562 55654577 NR2C2 JASPAR yes 70988042
chr3 55654569 55654572 MYB TRANSFAC yes 2532274
chr3 55654569 55654572 MYB TRANSFAC yes 70988043
chr3 55654571 55654592 ZNF263 JASPAR yes 2532275
chr3 55654571 55654592 ZNF263 JASPAR yes 70988044
chr3 55654575 55654580 MYC TRANSFAC yes 2532276
chr3 55654575 55654580 MYC TRANSFAC yes 70988045
chr3 55654581 55654592 FLI1 JASPAR yes 2532277
chr3 55654581 55654592 FLI1 JASPAR yes 70988046
chr3 55654585 55654592 SPIB JASPAR yes 2532278
chr3 55654585 55654592 SPIB JASPAR yes 70988047
chr3 55654661 55654672 HOXC13 JASPAR yes 2532279
chr3 55654661 55654672 HOXC13 JASPAR yes 70988048
chr3 55654670 55654681 CDX2 JASPAR yes 2532280
chr3 55654670 55654681 CDX2 JASPAR yes 70988049
chr3 55654671 55654682 HOXA10 JASPAR yes 2532281
chr3 55654671 55654682 HOXA10 JASPAR yes 70988050
chr3 55654672 55654676 H1TF2 TRANSFAC yes 2532282
chr3 55654672 55654676 NFE TRANSFAC yes 2532283
chr3 55654672 55654676 SRF TRANSFAC yes 2532284
chr3 55654672 55654676 H1TF2 TRANSFAC yes 70988051
chr3 55654672 55654676 NFE TRANSFAC yes 70988052
chr3 55654672 55654676 SRF TRANSFAC yes 70988053
chr3 55654672 55654681 CDX1 JASPAR yes 2532285
chr3 55654672 55654681 CDX1 JASPAR yes 70988054
chr3 55654672 55654682 HOXA13 JASPAR yes 2532286
chr3 55654672 55654682 HOXB13 JASPAR yes 2532287
chr3 55654672 55654682 HOXD13 JASPAR yes 2532288
chr3 55654672 55654682 HOXA13 JASPAR yes 70988055
chr3 55654672 55654682 HOXB13 JASPAR yes 70988056
chr3 55654672 55654682 HOXD13 JASPAR yes 70988057
chr3 55654680 55654688 MEIS2 JASPAR yes 2532289
chr3 55654680 55654688 MEIS3 JASPAR yes 2532290
chr3 55654680 55654688 MEIS2 JASPAR yes 70988058
chr3 55654680 55654688 MEIS3 JASPAR yes 70988059
chr3 55654682 55654692 ID4 JASPAR yes 2532291
chr3 55654682 55654692 ID4 JASPAR yes 70988060
chr3 55654683 55654702 REST JASPAR yes 2532292
chr3 55654683 55654702 REST JASPAR yes 70988061
chr3 55654739 55654742 MYB TRANSFAC yes 2532293
chr3 55654739 55654742 MYB TRANSFAC yes 70988062
chr3 55654755 55654769 STAT1 JASPAR yes 2532294
chr3 55654755 55654769 STAT1 JASPAR yes 70988063
chr3 55654755 55654770 STAT2 JASPAR yes 2532295
chr3 55654755 55654770 STAT2 JASPAR yes 70988064
chr3 55654756 55654770 TCF7L2 JASPAR yes 2532296
chr3 55654756 55654770 TCF7L2 JASPAR yes 70988065
chr3 55654792 55654803 CDX2 JASPAR yes 2532297
chr3 55654792 55654803 CDX2 JASPAR yes 70988066
chr3 55654794 55654803 CDX1 JASPAR yes 2532298
chr3 55654794 55654803 CDX1 JASPAR yes 70988067
chr3 55654794 55654804 HOXC10 JASPAR yes 2532299
chr3 55654794 55654804 HOXD11 JASPAR yes 2532300
chr3 55654794 55654804 HOXC10 JASPAR yes 70988068
chr3 55654794 55654804 HOXD11 JASPAR yes 70988069
chr3 55654810 55654821 PHOX2A JASPAR yes 2532301
chr3 55654810 55654821 PHOX2A JASPAR yes 70988070
chr3 55654821 55654827 MZF1 JASPAR yes 2532302
chr3 55654821 55654827 MZF1 JASPAR yes 70988071
chr3 55654837 55654841 NFE TRANSFAC yes 2532303
chr3 55654837 55654841 NFE TRANSFAC yes 70988072
chr3 55654837 55654842 GATA1 TRANSFAC yes 2532304
chr3 55654837 55654842 GATA1 TRANSFAC yes 70988073
chr3 55654837 55654843 GATA3 JASPAR yes 2532305
chr3 55654837 55654843 GATA3 JASPAR yes 70988074
SNP sites on vista41047[chr3:55654086-55654842]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 55654087 rs114497349 C T
RXRB RXRG TCF7L2
6747832
chr3 55654181 rs9873682 C G
RORA
6747833
chr3 55654432 rs192792229 C T
ELF1 IRF1 SPI1 STAT1 STAT2 TCF7L2
6747834
chr3 55654442 rs540427408 A G
ELF1 EN2 IRF1 RUNX1 RUNX2 SPI1
6747835
chr3 55654580 rs75714519 G A
MYC ZNF263
6747836
chr3 55654631 rs140487371 A C no 6747837
chr3 55654643 rs370354336 TTGTCACAG T no 6747838
chr3 55654760 rs183227883 C T
STAT1 STAT2 TCF7L2
6747839
Genes possibly regulated by vista41047[chr3:55654086-55654842]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
Back to top
No results
miRNAs possibly regulated by vista41047[chr3:55654086-55654842]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results