EnhancerDB
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  3. vista4143[chr1:182580570-182580950]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4143[chr1:182580570-182580950]
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Tissue distribution of vista4143
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Transcription factor that possibly regulate vista4143[chr1:182580570-182580950]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 182580497 182580869 RUNX3 UCSC Txn Factor no Conserved 107850370
chr1 182580553 182580869 EBF1 UCSC Txn Factor no Conserved 107850383
chr1 182580569 182580826 BATF UCSC Txn Factor no Conserved 107850384
chr1 182580614 182580757 BHLHE40 UCSC Txn Factor no Conserved 107850388
chr1 182580554 182580575 ZNF263 JASPAR yes 33625397
chr1 182580554 182580575 ZNF263 JASPAR yes 118410723
chr1 182580586 182580601 HSF1 JASPAR yes 33625399
chr1 182580586 182580601 HSF1 JASPAR yes 118410724
chr1 182580617 182580626 JDP2 JASPAR yes 33625400
chr1 182580617 182580626 JDP2 JASPAR yes 118410725
chr1 182580627 182580646 REST JASPAR yes 33625401
chr1 182580627 182580646 REST JASPAR yes 118410726
chr1 182580629 182580644 RFX5 JASPAR yes 33625402
chr1 182580629 182580644 RFX5 JASPAR yes 118410727
chr1 182580635 182580650 AR JASPAR yes 33625403
chr1 182580635 182580650 AR JASPAR yes 118410728
chr1 182580640 182580660 TP63 JASPAR yes 33625404
chr1 182580640 182580660 TP63 JASPAR yes 118410729
chr1 182580641 182580659 TP53 JASPAR yes 33625405
chr1 182580641 182580659 TP63 JASPAR yes 33625406
chr1 182580641 182580659 TP73 JASPAR yes 33625407
chr1 182580641 182580659 TP53 JASPAR yes 118410730
chr1 182580641 182580659 TP63 JASPAR yes 118410731
chr1 182580641 182580659 TP73 JASPAR yes 118410732
chr1 182580642 182580657 TP53 JASPAR yes 33625408
chr1 182580642 182580657 TP53 JASPAR yes 118410733
chr1 182580643 182580658 TP53 JASPAR yes 33625409
chr1 182580643 182580658 TP53 JASPAR yes 118410734
chr1 182580652 182580662 MAX JASPAR yes 33625410
chr1 182580652 182580662 MAX JASPAR yes 118410735
chr1 182580659 182580674 RUNX2 JASPAR yes 33625411
chr1 182580659 182580674 RUNX2 JASPAR yes 118410736
chr1 182580668 182580678 BHLHE40 JASPAR yes 33625412
chr1 182580668 182580678 CLOCK JASPAR yes 33625413
chr1 182580668 182580678 HEY1 JASPAR yes 33625414
chr1 182580668 182580678 MAX JASPAR yes 33625415
chr1 182580668 182580678 MNT JASPAR yes 33625416
chr1 182580668 182580678 BHLHE40 JASPAR yes 118410737
chr1 182580668 182580678 CLOCK JASPAR yes 118410738
chr1 182580668 182580678 HEY1 JASPAR yes 118410739
chr1 182580668 182580678 MAX JASPAR yes 118410740
chr1 182580668 182580678 MNT JASPAR yes 118410741
chr1 182580670 182580675 MYC TRANSFAC yes 33625417
chr1 182580670 182580675 USF1 TRANSFAC yes 33625418
chr1 182580670 182580675 USF2 TRANSFAC yes 33625419
chr1 182580670 182580675 MYC TRANSFAC yes 118410742
chr1 182580670 182580675 USF1 TRANSFAC yes 118410743
chr1 182580670 182580675 USF2 TRANSFAC yes 118410744
chr1 182580686 182580703 RXRA JASPAR yes 33625420
chr1 182580686 182580703 RXRA JASPAR yes 118410745
chr1 182580687 182580691 ESR1 TRANSFAC yes 33625421
chr1 182580687 182580691 ESR1 TRANSFAC yes 118410746
chr1 182580697 182580707 SP1 JASPAR yes 33625422
chr1 182580697 182580707 SP1 JASPAR yes 118410747
chr1 182580699 182580705 MAZ TRANSFAC yes 33625423
chr1 182580699 182580705 MAZ TRANSFAC yes 118410748
chr1 182580705 182580716 NFE2L2 JASPAR yes 33625424
chr1 182580705 182580716 NFE2L2 JASPAR yes 118410749
chr1 182580707 182580713 SOX10 JASPAR yes 33625425
chr1 182580707 182580713 SOX10 JASPAR yes 118410750
chr1 182580713 182580727 EBF1 JASPAR yes 33625426
chr1 182580713 182580727 EBF1 JASPAR yes 118410751
chr1 182580714 182580725 EBF1 JASPAR yes 33625427
chr1 182580714 182580725 EBF1 JASPAR yes 118410752
chr1 182580729 182580743 RORA JASPAR yes 33625428
chr1 182580729 182580743 RORA JASPAR yes 118410753
chr1 182580737 182580751 GLIS2 JASPAR yes 33625429
chr1 182580737 182580751 GLIS3 JASPAR yes 33625430
chr1 182580737 182580751 GLIS2 JASPAR yes 118410754
chr1 182580737 182580751 GLIS3 JASPAR yes 118410755
chr1 182580752 182580762 SP1 JASPAR yes 33625431
chr1 182580752 182580762 SP1 JASPAR yes 118410756
chr1 182580762 182580773 FOSL1 JASPAR yes 33625432
chr1 182580762 182580773 FOSL1 JASPAR yes 118410757
chr1 182580763 182580774 JUNB JASPAR yes 33625433
chr1 182580763 182580774 JUNB JASPAR yes 118410758
chr1 182580763 182580777 JUN JASPAR yes 33625434
chr1 182580763 182580777 JUN JASPAR yes 118410759
chr1 182580769 182580786 BCL6B JASPAR yes 33625435
chr1 182580769 182580786 BCL6B JASPAR yes 118410760
chr1 182580780 182580796 RFX2 JASPAR yes 33625436
chr1 182580780 182580796 RFX2 JASPAR yes 118410761
chr1 182580781 182580800 RFX2 JASPAR yes 33625437
chr1 182580781 182580800 RFX2 JASPAR yes 118410762
chr1 182580782 182580788 MZF1 JASPAR yes 33625438
chr1 182580782 182580788 MZF1 JASPAR yes 118410763
chr1 182580783 182580798 RFX5 JASPAR yes 33625439
chr1 182580783 182580798 RFX5 JASPAR yes 118410764
chr1 182580791 182580806 PRDM1 JASPAR yes 33625440
chr1 182580791 182580806 PRDM1 JASPAR yes 118410765
chr1 182580796 182580817 ZNF263 JASPAR yes 33625441
chr1 182580796 182580817 ZNF263 JASPAR yes 118410766
chr1 182580799 182580820 ZNF263 JASPAR yes 33625442
chr1 182580799 182580820 ZNF263 JASPAR yes 118410767
chr1 182580800 182580820 RREB1 JASPAR yes 33625443
chr1 182580800 182580820 RREB1 JASPAR yes 118410768
chr1 182580801 182580821 RREB1 JASPAR yes 33625444
chr1 182580801 182580821 RREB1 JASPAR yes 118410769
chr1 182580805 182580815 SP1 JASPAR yes 33625445
chr1 182580805 182580815 SP1 JASPAR yes 118410770
chr1 182580808 182580813 SP1 TRANSFAC yes 33625446
chr1 182580808 182580813 SP1 TRANSFAC yes 118410771
chr1 182580809 182580819 ZNF740 JASPAR yes 33625447
chr1 182580809 182580819 ZNF740 JASPAR yes 118410772
chr1 182580811 182580821 SP1 JASPAR yes 33625448
chr1 182580811 182580821 SP1 JASPAR yes 118410773
chr1 182580814 182580819 SP1 TRANSFAC yes 33625449
chr1 182580814 182580819 SP1 TRANSFAC yes 118410774
chr1 182580818 182580822 LFA1 TRANSFAC yes 33625450
chr1 182580818 182580822 LFA1 TRANSFAC yes 118410775
chr1 182580834 182580838 LFA1 TRANSFAC yes 33625451
chr1 182580834 182580838 LFA1 TRANSFAC yes 118410776
chr1 182580851 182580855 YY1 TRANSFAC yes 33625452
chr1 182580851 182580855 YY1 TRANSFAC yes 118410777
chr1 182580852 182580862 HOXA13 JASPAR yes 33625453
chr1 182580852 182580862 HOXB13 JASPAR yes 33625454
chr1 182580852 182580862 HOXD13 JASPAR yes 33625455
chr1 182580852 182580862 HOXA13 JASPAR yes 118410778
chr1 182580852 182580862 HOXB13 JASPAR yes 118410779
chr1 182580852 182580862 HOXD13 JASPAR yes 118410780
chr1 182580852 182580867 STAT1 JASPAR yes 33625456
chr1 182580852 182580867 STAT1 JASPAR yes 118410781
chr1 182580854 182580865 STAT1 JASPAR yes 33625457
chr1 182580854 182580865 STAT3 JASPAR yes 33625458
chr1 182580854 182580865 STAT1 JASPAR yes 118410782
chr1 182580854 182580865 STAT3 JASPAR yes 118410783
chr1 182580902 182580915 ZBED1 JASPAR yes 33625459
chr1 182580902 182580915 ZBED1 JASPAR yes 118410784
chr1 182580903 182580916 ZBED1 JASPAR yes 33625460
chr1 182580903 182580916 ZBED1 JASPAR yes 118410785
chr1 182580922 182580930 RHOXF1 JASPAR yes 33625461
chr1 182580922 182580930 RHOXF1 JASPAR yes 118410786
chr1 182580941 182580955 MTF1 JASPAR yes 33625462
chr1 182580941 182580955 MTF1 JASPAR yes 118410787
SNP sites on vista4143[chr1:182580570-182580950]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 182580805 rs5779141 AG A
BATF EBF1 PRDM1 RREB1 RUNX3 SP1 ZNF263
775422
chr1 182580805 rs747656274 AG A
BATF EBF1 PRDM1 RREB1 RUNX3 SP1 ZNF263
775423
chr1 182580812 rs376726459 G A,C
BATF EBF1 RREB1 RUNX3 SP1 ZNF263 ZNF740
775424
Genes possibly regulated by vista4143[chr1:182580570-182580950]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 182542769 182558391 - RNASEL ENSG00000135828.7 182558391 0.59 0.99 1631 77821
chr1 182567758 182573543 - RGS16 ENSG00000143333.6 182573543 0.92 1.0 1632 92973
chr1 182615239 182653711 - RGS8 ENSG00000135824.8 182653711 0.98 0.99 1633 27239
Expression level of Genes
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miRNAs possibly regulated by vista4143[chr1:182580570-182580950]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results