EnhancerDB
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  3. rs5779141[chr1:182580805]
Enhancers that have rs5779141[chr1:182580805]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182579165 182589384 enh796
Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Uterus Thymus Heart
chr1 182580570 182580950 vista4143
VISTA
Transcript factors that have rs5779141[chr1:182580805]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182580164 182580935 ZNF143 GTRD no Epithelial (MCF-7) 107850361
chr1 182580167 182580864 ZNF143 GTRD no Epithelial (MCF-7) 107850362
chr1 182580337 182580997 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358305
chr1 182580337 182580997 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850363
chr1 182580365 182580995 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358306
chr1 182580365 182580995 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850364
chr1 182580367 182580963 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358307
chr1 182580367 182580963 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850365
chr1 182580448 182580968 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358308
chr1 182580448 182580968 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850366
chr1 182580469 182580905 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358309
chr1 182580469 182580905 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850367
chr1 182580480 182580864 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358310
chr1 182580480 182580864 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850368
chr1 182580493 182580903 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358311
chr1 182580493 182580903 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850369
chr1 182580497 182580869 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358312
chr1 182580497 182580869 RUNX3 UCSC Txn Factor no Conserved 107850370
chr1 182580497 182580869 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850371
chr1 182580505 182580879 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358313
chr1 182580505 182580879 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850372
chr1 182580512 182580832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358315
chr1 182580512 182580832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850374
chr1 182580525 182580881 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358316
chr1 182580525 182580881 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850375
chr1 182580527 182580807 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358317
chr1 182580527 182580807 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850376
chr1 182580528 182580872 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21358318
chr1 182580528 182580872 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107850377
chr1 182580535 182580855 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358320
chr1 182580535 182580855 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850379
chr1 182580541 182580844 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358322
chr1 182580541 182580844 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850381
chr1 182580543 182580873 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358323
chr1 182580543 182580873 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850382
chr1 182580553 182580869 EBF1 UCSC Txn Factor no Conserved 107850383
chr1 182580569 182580826 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358324
chr1 182580569 182580826 BATF UCSC Txn Factor no Conserved 107850384
chr1 182580569 182580826 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850385
chr1 182580576 182580866 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358325
chr1 182580576 182580866 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850386
chr1 182580581 182580834 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21358326
chr1 182580581 182580834 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850387
chr1 182580615 182581285 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21358328
chr1 182580615 182581285 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107850390
chr1 182580791 182580806 PRDM1 JASPAR yes 33625440
chr1 182580791 182580806 PRDM1 JASPAR yes 118410765
chr1 182580796 182580817 ZNF263 JASPAR yes 33625441
chr1 182580796 182580817 ZNF263 JASPAR yes 118410766
chr1 182580799 182580820 ZNF263 JASPAR yes 33625442
chr1 182580799 182580820 ZNF263 JASPAR yes 118410767
chr1 182580800 182580820 RREB1 JASPAR yes 33625443
chr1 182580800 182580820 RREB1 JASPAR yes 118410768
chr1 182580801 182580821 RREB1 JASPAR yes 33625444
chr1 182580801 182580821 RREB1 JASPAR yes 118410769
chr1 182580805 182580815 SP1 JASPAR yes 33625445
chr1 182580805 182580815 SP1 JASPAR yes 118410770
Genes associated with rs5779141[chr1:182580805], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More