EnhancerDB
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  3. vista42307[chr3:126854229-126854593]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42307[chr3:126854229-126854593]
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Tissue distribution of vista42307
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Transcription factor that possibly regulate vista42307[chr3:126854229-126854593]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 126854215 126854481 GATA2 UCSC Txn Factor no Conserved 108530223
chr3 126854222 126854240 ESR1 JASPAR yes 5516983
chr3 126854222 126854240 ESR1 JASPAR yes 71046009
chr3 126854252 126854260 MEIS2 JASPAR yes 5516984
chr3 126854252 126854260 MEIS3 JASPAR yes 5516985
chr3 126854252 126854260 MEIS2 JASPAR yes 71046010
chr3 126854252 126854260 MEIS3 JASPAR yes 71046011
chr3 126854253 126854257 NFE TRANSFAC yes 5516986
chr3 126854253 126854257 NFE TRANSFAC yes 71046012
chr3 126854293 126854300 NFATC2 JASPAR yes 5516987
chr3 126854293 126854300 NFATC2 JASPAR yes 71046013
chr3 126854294 126854302 FOXO3 JASPAR yes 5516988
chr3 126854294 126854302 FOXO3 JASPAR yes 71046014
chr3 126854304 126854318 GLIS2 JASPAR yes 5516989
chr3 126854304 126854318 ZIC1 JASPAR yes 5516990
chr3 126854304 126854318 GLIS2 JASPAR yes 71046015
chr3 126854304 126854318 ZIC1 JASPAR yes 71046016
chr3 126854305 126854325 ESR1 JASPAR yes 5516991
chr3 126854305 126854325 ESR1 JASPAR yes 71046017
chr3 126854312 126854317 SP1 TRANSFAC yes 5516992
chr3 126854312 126854317 SP1 TRANSFAC yes 71046018
chr3 126854313 126854327 NR2F1 JASPAR yes 5516993
chr3 126854313 126854327 NR2F1 JASPAR yes 71046019
chr3 126854331 126854342 E2F4 JASPAR yes 5516994
chr3 126854331 126854342 E2F4 JASPAR yes 71046020
chr3 126854334 126854340 SP1 TRANSFAC yes 5516995
chr3 126854334 126854340 SP1 TRANSFAC yes 71046021
chr3 126854336 126854341 SP1 TRANSFAC yes 5516996
chr3 126854336 126854341 SP1 TRANSFAC yes 71046022
chr3 126854342 126854361 RFX2 JASPAR yes 5516997
chr3 126854342 126854361 RFX2 JASPAR yes 71046023
chr3 126854344 126854352 MEIS2 JASPAR yes 5516998
chr3 126854344 126854352 MEIS3 JASPAR yes 5516999
chr3 126854344 126854352 MEIS2 JASPAR yes 71046024
chr3 126854344 126854352 MEIS3 JASPAR yes 71046025
chr3 126854344 126854359 RFX5 JASPAR yes 5517000
chr3 126854344 126854359 RFX5 JASPAR yes 71046026
chr3 126854345 126854349 NFE TRANSFAC yes 5517001
chr3 126854345 126854349 NFE TRANSFAC yes 71046027
chr3 126854346 126854362 RFX5 JASPAR yes 5517002
chr3 126854346 126854362 RFX5 JASPAR yes 71046028
chr3 126854347 126854366 RFX2 JASPAR yes 5517003
chr3 126854347 126854366 RFX2 JASPAR yes 71046029
chr3 126854372 126854375 MYB TRANSFAC yes 5517004
chr3 126854372 126854375 MYB TRANSFAC yes 71046030
chr3 126854383 126854396 NFKB2 JASPAR yes 5517005
chr3 126854383 126854396 NFKB2 JASPAR yes 71046031
chr3 126854384 126854395 NFKB1 JASPAR yes 5517006
chr3 126854384 126854395 NFKB1 JASPAR yes 71046032
chr3 126854385 126854395 REL JASPAR yes 5517007
chr3 126854385 126854395 REL JASPAR yes 71046033
chr3 126854385 126854396 NFKB1 JASPAR yes 5517008
chr3 126854385 126854396 NFKB1 JASPAR yes 71046034
chr3 126854391 126854400 VENTX JASPAR yes 5517009
chr3 126854391 126854400 VENTX JASPAR yes 71046035
chr3 126854392 126854400 BSX JASPAR yes 5517010
chr3 126854392 126854400 BSX JASPAR yes 71046036
chr3 126854394 126854398 YY1 TRANSFAC yes 5517011
chr3 126854394 126854398 YY1 TRANSFAC yes 71046037
chr3 126854414 126854428 PAX6 JASPAR yes 5517012
chr3 126854414 126854428 PAX6 JASPAR yes 71046038
chr3 126854429 126854441 HINFP JASPAR yes 5517013
chr3 126854429 126854441 HINFP JASPAR yes 71046039
chr3 126854452 126854462 ALX3 JASPAR yes 5517014
chr3 126854452 126854462 EN2 JASPAR yes 5517015
chr3 126854452 126854462 ALX3 JASPAR yes 71046040
chr3 126854452 126854462 EN2 JASPAR yes 71046041
chr3 126854453 126854461 BSX JASPAR yes 5517016
chr3 126854453 126854461 DLX6 JASPAR yes 5517017
chr3 126854453 126854461 MSX1 JASPAR yes 5517018
chr3 126854453 126854461 MSX2 JASPAR yes 5517019
chr3 126854453 126854461 BSX JASPAR yes 71046042
chr3 126854453 126854461 DLX6 JASPAR yes 71046043
chr3 126854453 126854461 MSX1 JASPAR yes 71046044
chr3 126854453 126854461 MSX2 JASPAR yes 71046045
chr3 126854473 126854477 YY1 TRANSFAC yes 5517020
chr3 126854473 126854477 YY1 TRANSFAC yes 71046046
chr3 126854482 126854486 NFE TRANSFAC yes 5517021
chr3 126854482 126854486 NFE TRANSFAC yes 71046047
chr3 126854493 126854498 SP1 TRANSFAC yes 5517022
chr3 126854493 126854498 SP1 TRANSFAC yes 71046048
chr3 126854499 126854510 E2F4 JASPAR yes 5517023
chr3 126854499 126854510 E2F6 JASPAR yes 5517024
chr3 126854499 126854510 E2F4 JASPAR yes 71046049
chr3 126854499 126854510 E2F6 JASPAR yes 71046050
chr3 126854499 126854520 ZNF263 JASPAR yes 5517025
chr3 126854499 126854520 ZNF263 JASPAR yes 71046051
chr3 126854500 126854511 E2F1 JASPAR yes 5517026
chr3 126854500 126854511 E2F1 JASPAR yes 71046052
chr3 126854500 126854521 ZNF263 JASPAR yes 5517027
chr3 126854500 126854521 ZNF263 JASPAR yes 71046053
chr3 126854502 126854512 SP1 JASPAR yes 5517028
chr3 126854502 126854512 SP1 JASPAR yes 71046054
chr3 126854503 126854510 SP1 TRANSFAC yes 5517029
chr3 126854503 126854510 SP1 TRANSFAC yes 71046055
chr3 126854504 126854509 SP1 TRANSFAC yes 5517030
chr3 126854504 126854509 SP1 TRANSFAC yes 71046056
chr3 126854504 126854510 SP1 TRANSFAC yes 5517031
chr3 126854504 126854510 SP1 TRANSFAC yes 71046057
chr3 126854504 126854511 SP1 TRANSFAC yes 5517032
chr3 126854504 126854511 SP1 TRANSFAC yes 71046058
chr3 126854505 126854513 WT1 TRANSFAC yes 5517033
chr3 126854505 126854513 WT1 TRANSFAC yes 71046059
chr3 126854508 126854518 SP1 JASPAR yes 5517034
chr3 126854508 126854518 SP1 JASPAR yes 71046060
chr3 126854519 126854528 TFAP2A JASPAR yes 5517035
chr3 126854519 126854528 TFAP2A JASPAR yes 71046061
chr3 126854543 126854557 STAT1 JASPAR yes 5517036
chr3 126854543 126854557 STAT1 JASPAR yes 71046062
chr3 126854570 126854584 RORA JASPAR yes 5517037
chr3 126854570 126854584 RORA JASPAR yes 71046063
chr3 126854571 126854581 RORA JASPAR yes 5517038
chr3 126854571 126854581 RORA JASPAR yes 71046064
chr3 126854577 126854587 NFATC3 JASPAR yes 5517039
chr3 126854577 126854587 NFATC3 JASPAR yes 71046065
chr3 126854587 126854593 SOX10 JASPAR yes 5517040
chr3 126854587 126854593 SOX10 JASPAR yes 71046066
chr3 126854593 126854597 YY1 TRANSFAC yes 5517041
chr3 126854593 126854597 YY1 TRANSFAC yes 71046067
SNP sites on vista42307[chr3:126854229-126854593]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 126854335 rs182302178 C T
E2F4 GATA2 SP1
7011964
chr3 126854344 rs77251534 C G
GATA2 MEIS2 MEIS3 RFX2 RFX5
7011965
chr3 126854382 rs142861110 G T
GATA2
7011966
chr3 126854436 rs562275414 A ACGGTCGCAGTCCCGACTGACACG,ATGGTCGCCGTCC
GATA2 HINFP
7011967
chr3 126854439 rs142595629 G GCTGACACGCGC,GTCGCCGTCCCGGCTGACACGCGC
GATA2 HINFP
7011968
Genes possibly regulated by vista42307[chr3:126854229-126854593]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 126911974 126917025 + C3orf56 ENSG00000214324.1 126911974 0.0 0.0 4042 42619
Expression level of Genes
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miRNAs possibly regulated by vista42307[chr3:126854229-126854593]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr3 127294110 127294131 - hsa-miR-6825-3p MIMAT0027551 127309575 0.011438469478341349 0.916667 0.0 1196
Expression level of miRNAs
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