EnhancerDB
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  3. vista42326[chr3:127469268-127470071]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42326[chr3:127469268-127470071]
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Tissue distribution of vista42326
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Transcription factor that possibly regulate vista42326[chr3:127469268-127470071]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 127469092 127469904 NFIC UCSC Txn Factor no Conserved 108530240
chr3 127469093 127469475 PAX5 UCSC Txn Factor no Conserved 108530241
chr3 127469130 127469920 IKZF1 UCSC Txn Factor no Conserved 108530242
chr3 127469192 127469938 RUNX3 UCSC Txn Factor no Conserved 108530243
chr3 127469234 127469567 EBF1 UCSC Txn Factor no Conserved 108530244
chr3 127469262 127469532 TCF12 UCSC Txn Factor no Conserved 108530245
chr3 127469582 127469826 FOS UCSC Txn Factor no Conserved 108530246
chr3 127469612 127469846 BATF UCSC Txn Factor no Conserved 108530247
chr3 127469616 127469969 EBF1 UCSC Txn Factor no Conserved 108530248
chr3 127469267 127469282 PRDM1 JASPAR yes 5544200
chr3 127469267 127469282 PRDM1 JASPAR yes 71047084
chr3 127469281 127469284 MYB TRANSFAC yes 5544201
chr3 127469281 127469284 MYB TRANSFAC yes 71047085
chr3 127469298 127469313 FOXP1 JASPAR yes 5544202
chr3 127469298 127469313 FOXP1 JASPAR yes 71047086
chr3 127469325 127469336 E2F6 JASPAR yes 5544203
chr3 127469325 127469336 E2F6 JASPAR yes 71047087
chr3 127469344 127469365 ZNF263 JASPAR yes 5544204
chr3 127469344 127469365 ZNF263 JASPAR yes 71047088
chr3 127469347 127469353 PEA3 TRANSFAC yes 5544205
chr3 127469347 127469353 PEA3 TRANSFAC yes 71047089
chr3 127469358 127469368 NFKB1 JASPAR yes 5544206
chr3 127469358 127469368 NFKB1 JASPAR yes 71047090
chr3 127469367 127469386 CTCF JASPAR yes 5544207
chr3 127469367 127469386 CTCF JASPAR yes 71047091
chr3 127469372 127469381 SNAI2 JASPAR yes 5544208
chr3 127469372 127469381 SNAI2 JASPAR yes 71047092
chr3 127469372 127469382 FIGLA JASPAR yes 5544209
chr3 127469372 127469382 TCF3 JASPAR yes 5544210
chr3 127469372 127469382 FIGLA JASPAR yes 71047093
chr3 127469372 127469382 TCF3 JASPAR yes 71047094
chr3 127469385 127469405 PPARG JASPAR yes 5544211
chr3 127469385 127469405 PPARG JASPAR yes 71047095
chr3 127469387 127469401 EBF1 JASPAR yes 5544212
chr3 127469387 127469401 EBF1 JASPAR yes 71047096
chr3 127469388 127469399 EBF1 JASPAR yes 5544213
chr3 127469388 127469399 EBF1 JASPAR yes 71047097
chr3 127469406 127469418 TAL1 JASPAR yes 5544214
chr3 127469406 127469418 TAL1 JASPAR yes 71047098
chr3 127469408 127469418 MYF6 JASPAR yes 5544215
chr3 127469408 127469418 NEUROG2 JASPAR yes 5544216
chr3 127469408 127469418 MYF6 JASPAR yes 71047099
chr3 127469408 127469418 NEUROG2 JASPAR yes 71047100
chr3 127469408 127469420 TAL1 JASPAR yes 5544217
chr3 127469408 127469420 TAL1 JASPAR yes 71047101
chr3 127469423 127469433 NFIA JASPAR yes 5544218
chr3 127469423 127469433 NFIA JASPAR yes 71047102
chr3 127469425 127469431 NFIC JASPAR yes 5544219
chr3 127469425 127469431 NFIC JASPAR yes 71047103
chr3 127469429 127469444 RUNX2 JASPAR yes 5544220
chr3 127469429 127469444 RUNX2 JASPAR yes 71047104
chr3 127469430 127469439 RUNX2 JASPAR yes 5544221
chr3 127469430 127469439 RUNX2 JASPAR yes 71047105
chr3 127469430 127469440 RUNX3 JASPAR yes 5544222
chr3 127469430 127469440 RUNX3 JASPAR yes 71047106
chr3 127469430 127469441 RUNX1 JASPAR yes 5544223
chr3 127469430 127469441 RUNX1 JASPAR yes 71047107
chr3 127469430 127469445 SCRT1 JASPAR yes 5544224
chr3 127469430 127469445 SCRT1 JASPAR yes 71047108
chr3 127469442 127469453 BATF JASPAR yes 5544225
chr3 127469442 127469453 BATF JASPAR yes 71047109
chr3 127469447 127469451 YY1 TRANSFAC yes 5544226
chr3 127469447 127469451 YY1 TRANSFAC yes 71047110
chr3 127469460 127469464 LFA1 TRANSFAC yes 5544227
chr3 127469460 127469464 LFA1 TRANSFAC yes 71047111
chr3 127469460 127469480 ESR1 JASPAR yes 5544228
chr3 127469460 127469480 ESR1 JASPAR yes 71047112
chr3 127469500 127469505 GATA2 JASPAR yes 5544229
chr3 127469500 127469505 GATA2 JASPAR yes 71047113
chr3 127469532 127469538 JUN TRANSFAC yes 5544230
chr3 127469532 127469538 JUN TRANSFAC yes 71047114
chr3 127469549 127469559 EN2 JASPAR yes 5544231
chr3 127469549 127469559 ESX1 JASPAR yes 5544232
chr3 127469549 127469559 GBX2 JASPAR yes 5544233
chr3 127469549 127469559 EN2 JASPAR yes 71047115
chr3 127469549 127469559 ESX1 JASPAR yes 71047116
chr3 127469549 127469559 GBX2 JASPAR yes 71047117
chr3 127469550 127469558 BARX1 JASPAR yes 5544234
chr3 127469550 127469558 BARX1 JASPAR yes 71047118
chr3 127469550 127469559 VENTX JASPAR yes 5544235
chr3 127469550 127469559 VENTX JASPAR yes 71047119
chr3 127469553 127469562 SRY JASPAR yes 5544236
chr3 127469553 127469562 SRY JASPAR yes 71047120
chr3 127469563 127469575 IRF1 JASPAR yes 5544237
chr3 127469563 127469575 IRF1 JASPAR yes 71047121
chr3 127469567 127469577 RELA JASPAR yes 5544238
chr3 127469567 127469577 REL JASPAR yes 5544239
chr3 127469567 127469577 RELA JASPAR yes 71047122
chr3 127469567 127469577 REL JASPAR yes 71047123
chr3 127469567 127469578 NFKB1 JASPAR yes 5544240
chr3 127469567 127469578 NFKB1 JASPAR yes 71047124
chr3 127469571 127469578 NFATC2 JASPAR yes 5544241
chr3 127469571 127469578 NFATC2 JASPAR yes 71047125
chr3 127469579 127469584 H4TF1 TRANSFAC yes 5544242
chr3 127469579 127469584 H4TF1 TRANSFAC yes 71047126
chr3 127469598 127469602 YY1 TRANSFAC yes 5544243
chr3 127469598 127469602 YY1 TRANSFAC yes 71047127
chr3 127469608 127469618 MZF1 JASPAR yes 5544244
chr3 127469608 127469618 MZF1 JASPAR yes 71047128
chr3 127469634 127469646 INSM1 JASPAR yes 5544245
chr3 127469634 127469646 INSM1 JASPAR yes 71047129
chr3 127469637 127469652 IRF9 JASPAR yes 5544246
chr3 127469637 127469652 IRF9 JASPAR yes 71047130
chr3 127469638 127469652 IRF7 JASPAR yes 5544247
chr3 127469638 127469652 IRF7 JASPAR yes 71047131
chr3 127469685 127469697 TAL1 JASPAR yes 5544248
chr3 127469685 127469697 TAL1 JASPAR yes 71047132
chr3 127469687 127469697 MSC JASPAR yes 5544249
chr3 127469687 127469697 TFAP4 JASPAR yes 5544250
chr3 127469687 127469697 MSC JASPAR yes 71047133
chr3 127469687 127469697 TFAP4 JASPAR yes 71047134
chr3 127469687 127469699 TAL1 JASPAR yes 5544251
chr3 127469687 127469699 TAL1 JASPAR yes 71047135
chr3 127469699 127469705 JUN TRANSFAC yes 5544252
chr3 127469699 127469705 JUN TRANSFAC yes 71047136
chr3 127469702 127469712 SREBF1 JASPAR yes 5544253
chr3 127469702 127469712 SREBF2 JASPAR yes 5544254
chr3 127469702 127469712 SREBF1 JASPAR yes 71047137
chr3 127469702 127469712 SREBF2 JASPAR yes 71047138
chr3 127469704 127469719 RUNX2 JASPAR yes 5544255
chr3 127469704 127469719 RUNX2 JASPAR yes 71047139
chr3 127469733 127469748 SOX21 JASPAR yes 5544256
chr3 127469733 127469748 SOX21 JASPAR yes 71047140
chr3 127469738 127469748 ALX3 JASPAR yes 5544257
chr3 127469738 127469748 ALX3 JASPAR yes 71047141
chr3 127469739 127469747 BSX JASPAR yes 5544258
chr3 127469739 127469747 DLX6 JASPAR yes 5544259
chr3 127469739 127469747 MSX1 JASPAR yes 5544260
chr3 127469739 127469747 MSX2 JASPAR yes 5544261
chr3 127469739 127469747 BSX JASPAR yes 71047142
chr3 127469739 127469747 DLX6 JASPAR yes 71047143
chr3 127469739 127469747 MSX1 JASPAR yes 71047144
chr3 127469739 127469747 MSX2 JASPAR yes 71047145
chr3 127469755 127469769 PAX6 JASPAR yes 5544262
chr3 127469755 127469769 PAX6 JASPAR yes 71047146
chr3 127469763 127469767 YY1 TRANSFAC yes 5544263
chr3 127469763 127469767 YY1 TRANSFAC yes 71047147
chr3 127469775 127469790 TFAP2C JASPAR yes 5544264
chr3 127469775 127469790 TFAP2C JASPAR yes 71047148
chr3 127469776 127469788 INSM1 JASPAR yes 5544265
chr3 127469776 127469788 INSM1 JASPAR yes 71047149
chr3 127469782 127469786 LFA1 TRANSFAC yes 5544266
chr3 127469782 127469786 LFA1 TRANSFAC yes 71047150
chr3 127469794 127469799 MYC TRANSFAC yes 5544267
chr3 127469794 127469799 MYC TRANSFAC yes 71047151
chr3 127469799 127469806 PEA3 TRANSFAC yes 5544268
chr3 127469799 127469806 PEA3 TRANSFAC yes 71047152
chr3 127469802 127469823 IRF1 JASPAR yes 5544269
chr3 127469802 127469823 IRF1 JASPAR yes 71047153
chr3 127469812 127469830 MAFF JASPAR yes 5544270
chr3 127469812 127469830 MAFF JASPAR yes 71047154
chr3 127469814 127469829 MAFK JASPAR yes 5544271
chr3 127469814 127469829 MAFK JASPAR yes 71047155
chr3 127469827 127469848 ZNF263 JASPAR yes 5544272
chr3 127469827 127469848 ZNF263 JASPAR yes 71047156
chr3 127469903 127469918 TFAP2A JASPAR yes 5544273
chr3 127469903 127469918 TFAP2A JASPAR yes 71047157
chr3 127469961 127469976 MEF2C JASPAR yes 5544274
chr3 127469961 127469976 MEF2C JASPAR yes 71047158
chr3 127469962 127469977 MEF2A JASPAR yes 5544275
chr3 127469962 127469977 MEF2A JASPAR yes 71047159
chr3 127469986 127469998 IRF1 JASPAR yes 5544276
chr3 127469986 127469998 IRF1 JASPAR yes 71047160
chr3 127469991 127469995 YY1 TRANSFAC yes 5544277
chr3 127469991 127469995 YY1 TRANSFAC yes 71047161
chr3 127470003 127470012 SOX9 JASPAR yes 5544278
chr3 127470003 127470012 SOX9 JASPAR yes 71047162
chr3 127470021 127470027 HiNF-A TRANSFAC yes 5544279
chr3 127470021 127470027 HiNF-A TRANSFAC yes 71047163
chr3 127470036 127470040 ESR1 TRANSFAC yes 5544280
chr3 127470036 127470040 ESR1 TRANSFAC yes 71047164
chr3 127470058 127470070 YY1 JASPAR yes 5544281
chr3 127470058 127470070 YY1 JASPAR yes 71047165
chr3 127470064 127470085 ZNF263 JASPAR yes 5544282
chr3 127470064 127470085 ZNF263 JASPAR yes 71047166
chr3 127470067 127470088 ZNF263 JASPAR yes 5544283
chr3 127470067 127470088 ZNF263 JASPAR yes 71047167
chr3 127470071 127470092 ZNF263 JASPAR yes 5544284
chr3 127470071 127470092 ZNF263 JASPAR yes 71047168
SNP sites on vista42326[chr3:127469268-127470071]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 127469364 rs73861707 G T
EBF1 IKZF1 NFIC NFKB1 PAX5 RUNX3 TCF12 ZNF263
7014909
chr3 127469395 rs497897 T C
EBF1 IKZF1 NFIC PAX5 PPARG RUNX3 TCF12
7014910
chr3 127469476 rs111577013 G GAC
EBF1 ESR1 IKZF1 NFIC RUNX3 TCF12
7014911
chr3 127469476 rs35649865 G GAC,GACAC
EBF1 ESR1 IKZF1 NFIC RUNX3 TCF12
7014912
chr3 127469551 rs142094892 C CTA
BARX1 EBF1 EN2 ESX1 GBX2 IKZF1 NFIC RUNX3 VENTX
7014913
chr3 127469586 rs17203659 T C
FOS IKZF1 NFIC RUNX3
7014914
chr3 127469630 rs147413022 T C
BATF EBF1 FOS IKZF1 NFIC RUNX3
7014915
chr3 127469684 rs554276065 C G
BATF EBF1 FOS IKZF1 NFIC RUNX3
7014916
chr3 127469719 rs577334294 A T
BATF EBF1 FOS IKZF1 NFIC RUNX2 RUNX3
7014917
chr3 127469858 rs192197382 T G
EBF1 IKZF1 NFIC RUNX3
7014918
chr3 127469895 rs605188 T C
EBF1 IKZF1 NFIC RUNX3
7014919
Genes possibly regulated by vista42326[chr3:127469268-127470071]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 127391778 127399768 + ABTB1 ENSG00000114626.13 127391778 0.82 1.0 4046 22510
chr3 127407909 127542051 - MGLL ENSG00000074416.9 127542051 0.85 0.99 4047 28020
Expression level of Genes
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miRNAs possibly regulated by vista42326[chr3:127469268-127470071]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results