EnhancerDB
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  3. rs142094892[chr3:127469551]
Enhancers that have rs142094892[chr3:127469551]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 127460425 127476155 enh7513
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
chr3 127469268 127470071 vista42326
VISTA
Transcript factors that have rs142094892[chr3:127469551]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 127469092 127469904 NFIC UCSC Txn Factor no Conserved 108530240
chr3 127469130 127469920 IKZF1 UCSC Txn Factor no Conserved 108530242
chr3 127469192 127469938 RUNX3 UCSC Txn Factor no Conserved 108530243
chr3 127469234 127469567 EBF1 UCSC Txn Factor no Conserved 108530244
chr3 127469549 127469559 EN2 JASPAR yes 5544231
chr3 127469549 127469559 ESX1 JASPAR yes 5544232
chr3 127469549 127469559 GBX2 JASPAR yes 5544233
chr3 127469549 127469559 EN2 JASPAR yes 71047115
chr3 127469549 127469559 ESX1 JASPAR yes 71047116
chr3 127469549 127469559 GBX2 JASPAR yes 71047117
chr3 127469550 127469558 BARX1 JASPAR yes 5544234
chr3 127469550 127469558 BARX1 JASPAR yes 71047118
chr3 127469550 127469559 VENTX JASPAR yes 5544235
chr3 127469550 127469559 VENTX JASPAR yes 71047119
Genes associated with rs142094892[chr3:127469551], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr3 127872297 128127485 + EEFSEC ENSG00000132394.6 127872297 402746 Pancreas 0.0811936 4051