EnhancerDB
  1. Home
  2. Enhancers
  3. vista42327[chr3:127470580-127470980]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42327[chr3:127470580-127470980]
Back to top
Tissue distribution of vista42327
Back to top
Transcription factor that possibly regulate vista42327[chr3:127470580-127470980]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 127470579 127470583 LFA1 TRANSFAC yes 5544372
chr3 127470579 127470583 LFA1 TRANSFAC yes 71047169
chr3 127470597 127470618 IRF1 JASPAR yes 5544373
chr3 127470597 127470618 IRF1 JASPAR yes 71047170
chr3 127470600 127470614 IRF7 JASPAR yes 5544374
chr3 127470600 127470614 IRF7 JASPAR yes 71047171
chr3 127470601 127470616 STAT2 JASPAR yes 5544375
chr3 127470601 127470616 STAT2 JASPAR yes 71047172
chr3 127470603 127470624 IRF1 JASPAR yes 5544376
chr3 127470603 127470624 IRF1 JASPAR yes 71047173
chr3 127470608 127470620 IRF1 JASPAR yes 5544377
chr3 127470608 127470620 IRF1 JASPAR yes 71047174
chr3 127470632 127470637 MYB TRANSFAC yes 5544378
chr3 127470632 127470637 MYB TRANSFAC yes 71047175
chr3 127470639 127470643 NFE TRANSFAC yes 5544379
chr3 127470639 127470643 NFE TRANSFAC yes 71047176
chr3 127470652 127470666 IRF7 JASPAR yes 5544380
chr3 127470652 127470666 IRF8 JASPAR yes 5544381
chr3 127470652 127470666 IRF7 JASPAR yes 71047177
chr3 127470652 127470666 IRF8 JASPAR yes 71047178
chr3 127470657 127470661 YY1 TRANSFAC yes 5544382
chr3 127470657 127470661 YY1 TRANSFAC yes 71047179
chr3 127470701 127470710 HIC2 JASPAR yes 5544383
chr3 127470701 127470710 HIC2 JASPAR yes 71047180
chr3 127470704 127470708 LFA1 TRANSFAC yes 5544384
chr3 127470704 127470708 LFA1 TRANSFAC yes 71047181
chr3 127470711 127470721 RELA JASPAR yes 5544385
chr3 127470711 127470721 REL JASPAR yes 5544386
chr3 127470711 127470721 RELA JASPAR yes 71047182
chr3 127470711 127470721 REL JASPAR yes 71047183
chr3 127470711 127470722 NFKB1 JASPAR yes 5544387
chr3 127470711 127470722 NFKB1 JASPAR yes 71047184
chr3 127470719 127470723 H1TF2 TRANSFAC yes 5544388
chr3 127470719 127470723 NFE TRANSFAC yes 5544389
chr3 127470719 127470723 SRF TRANSFAC yes 5544390
chr3 127470719 127470723 H1TF2 TRANSFAC yes 71047185
chr3 127470719 127470723 NFE TRANSFAC yes 71047186
chr3 127470719 127470723 SRF TRANSFAC yes 71047187
chr3 127470731 127470748 RARA JASPAR yes 5544391
chr3 127470731 127470748 RARA JASPAR yes 71047188
chr3 127470739 127470752 NR2F1 JASPAR yes 5544392
chr3 127470739 127470752 NR2F1 JASPAR yes 71047189
chr3 127470743 127470747 ESR1 TRANSFAC yes 5544393
chr3 127470743 127470747 ESR1 TRANSFAC yes 71047190
chr3 127470755 127470767 PKNOX2 JASPAR yes 5544394
chr3 127470755 127470767 PKNOX2 JASPAR yes 71047191
chr3 127470781 127470791 HMBOX1 JASPAR yes 5544395
chr3 127470781 127470791 HMBOX1 JASPAR yes 71047192
chr3 127470787 127470790 MYB TRANSFAC yes 5544396
chr3 127470787 127470790 MYB TRANSFAC yes 71047193
chr3 127470816 127470825 SRY JASPAR yes 5544397
chr3 127470816 127470825 SRY JASPAR yes 71047194
chr3 127470817 127470832 MEF2A JASPAR yes 5544398
chr3 127470817 127470832 MEF2A JASPAR yes 71047195
chr3 127470818 127470833 MEF2C JASPAR yes 5544399
chr3 127470818 127470833 MEF2C JASPAR yes 71047196
chr3 127470819 127470831 MEF2A JASPAR yes 5544400
chr3 127470819 127470831 MEF2B JASPAR yes 5544401
chr3 127470819 127470831 MEF2D JASPAR yes 5544402
chr3 127470819 127470831 MEF2A JASPAR yes 71047197
chr3 127470819 127470831 MEF2B JASPAR yes 71047198
chr3 127470819 127470831 MEF2D JASPAR yes 71047199
chr3 127470820 127470830 MEF2A JASPAR yes 5544403
chr3 127470820 127470830 MEF2A JASPAR yes 71047200
chr3 127470821 127470825 YY1 TRANSFAC yes 5544404
chr3 127470821 127470825 YY1 TRANSFAC yes 71047201
chr3 127470830 127470833 MYB TRANSFAC yes 5544405
chr3 127470830 127470833 MYB TRANSFAC yes 71047202
chr3 127470863 127470873 SREBF2 JASPAR yes 5544406
chr3 127470863 127470873 SREBF2 JASPAR yes 71047203
chr3 127470863 127470874 USF1 JASPAR yes 5544407
chr3 127470863 127470874 USF2 JASPAR yes 5544408
chr3 127470863 127470874 USF1 JASPAR yes 71047204
chr3 127470863 127470874 USF2 JASPAR yes 71047205
chr3 127470868 127470886 NFYA JASPAR yes 5544409
chr3 127470868 127470886 NFYA JASPAR yes 71047206
chr3 127470872 127470876 H1TF2 TRANSFAC yes 5544410
chr3 127470872 127470876 NFE TRANSFAC yes 5544411
chr3 127470872 127470876 SRF TRANSFAC yes 5544412
chr3 127470872 127470876 H1TF2 TRANSFAC yes 71047207
chr3 127470872 127470876 NFE TRANSFAC yes 71047208
chr3 127470872 127470876 SRF TRANSFAC yes 71047209
chr3 127470875 127470890 PRDM1 JASPAR yes 5544413
chr3 127470875 127470890 PRDM1 JASPAR yes 71047210
chr3 127470880 127470895 LEF1 JASPAR yes 5544414
chr3 127470880 127470895 LEF1 JASPAR yes 71047211
chr3 127470881 127470895 TCF7L2 JASPAR yes 5544415
chr3 127470881 127470895 TCF7L2 JASPAR yes 71047212
chr3 127470884 127470890 LEF1 TRANSFAC yes 5544416
chr3 127470884 127470890 TCF4 TRANSFAC yes 5544417
chr3 127470884 127470890 LEF1 TRANSFAC yes 71047213
chr3 127470884 127470890 TCF4 TRANSFAC yes 71047214
chr3 127470890 127470901 FOXH1 JASPAR yes 5544418
chr3 127470890 127470901 FOXH1 JASPAR yes 71047215
chr3 127470927 127470947 TBX19 JASPAR yes 5544419
chr3 127470927 127470947 TBX19 JASPAR yes 71047216
chr3 127470929 127470945 T JASPAR yes 5544420
chr3 127470929 127470945 T JASPAR yes 71047217
chr3 127470937 127470951 JUN JASPAR yes 5544421
chr3 127470937 127470951 JUN JASPAR yes 71047218
chr3 127470938 127470950 IRF1 JASPAR yes 5544422
chr3 127470938 127470950 IRF1 JASPAR yes 71047219
chr3 127470940 127470961 IRF1 JASPAR yes 5544423
chr3 127470940 127470961 IRF1 JASPAR yes 71047220
chr3 127470942 127470957 PRDM1 JASPAR yes 5544424
chr3 127470942 127470957 STAT2 JASPAR yes 5544425
chr3 127470942 127470957 PRDM1 JASPAR yes 71047221
chr3 127470942 127470957 STAT2 JASPAR yes 71047222
chr3 127470945 127470960 FOXP1 JASPAR yes 5544426
chr3 127470945 127470960 FOXP1 JASPAR yes 71047223
chr3 127470948 127470963 MEF2C JASPAR yes 5544427
chr3 127470948 127470963 MEF2C JASPAR yes 71047224
chr3 127470960 127470981 IRF1 JASPAR yes 5544428
chr3 127470960 127470981 IRF1 JASPAR yes 71047225
chr3 127470962 127470977 PRDM1 JASPAR yes 5544429
chr3 127470962 127470977 PRDM1 JASPAR yes 71047226
chr3 127470963 127470977 STAT1 JASPAR yes 5544430
chr3 127470963 127470977 STAT1 JASPAR yes 71047227
SNP sites on vista42327[chr3:127470580-127470980]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 127470596 rs111901919 C A no 7014927
chr3 127470597 rs116748367 A C
IRF1
7014928
chr3 127470603 rs75350089 T C
IRF1 IRF7 STAT2
7014929
chr3 127470648 rs112347894 C T no 7014930
chr3 127470713 rs113696760 G A
NFKB1 REL RELA
7014931
chr3 127470735 rs7637817 C T
RARA
7014932
chr3 127470843 rs141111505 T A no 7014933
chr3 127470894 rs181155040 G A
FOXH1 LEF1 TCF7L2
7014934
chr3 127470946 rs34517374 C CT
FOXP1 IRF1 JUN PRDM1 STAT2 TBX19
7014935
chr3 127470946 rs397698548 C CT
FOXP1 IRF1 JUN PRDM1 STAT2 TBX19
7014936
chr3 127470946 rs558081127 C CT
FOXP1 IRF1 JUN PRDM1 STAT2 TBX19
7014937
Genes possibly regulated by vista42327[chr3:127470580-127470980]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 127391778 127399768 + ABTB1 ENSG00000114626.13 127391778 0.82 1.0 4046 21198
chr3 127407909 127542051 - MGLL ENSG00000074416.9 127542051 0.85 0.99 4047 28929
Expression level of Genes
Back to top
miRNAs possibly regulated by vista42327[chr3:127470580-127470980]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results