EnhancerDB
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  3. rs558081127[chr3:127470946]
Enhancers that have rs558081127[chr3:127470946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 127460425 127476155 enh7513
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
chr3 127470580 127470980 vista42327
VISTA
Transcript factors that have rs558081127[chr3:127470946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 127470927 127470947 TBX19 JASPAR yes 5544419
chr3 127470927 127470947 TBX19 JASPAR yes 71047216
chr3 127470937 127470951 JUN JASPAR yes 5544421
chr3 127470937 127470951 JUN JASPAR yes 71047218
chr3 127470938 127470950 IRF1 JASPAR yes 5544422
chr3 127470938 127470950 IRF1 JASPAR yes 71047219
chr3 127470940 127470961 IRF1 JASPAR yes 5544423
chr3 127470940 127470961 IRF1 JASPAR yes 71047220
chr3 127470942 127470957 PRDM1 JASPAR yes 5544424
chr3 127470942 127470957 STAT2 JASPAR yes 5544425
chr3 127470942 127470957 PRDM1 JASPAR yes 71047221
chr3 127470942 127470957 STAT2 JASPAR yes 71047222
chr3 127470945 127470960 FOXP1 JASPAR yes 5544426
chr3 127470945 127470960 FOXP1 JASPAR yes 71047223
Genes associated with rs558081127[chr3:127470946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More