EnhancerDB
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  3. vista42328[chr3:127472997-127473428]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42328[chr3:127472997-127473428]
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Tissue distribution of vista42328
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Transcription factor that possibly regulate vista42328[chr3:127472997-127473428]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 127473069 127473274 SRF UCSC Txn Factor no Conserved 108530249
chr3 127472982 127472997 JUND JASPAR yes 5544681
chr3 127472982 127472997 JUND JASPAR yes 71047228
chr3 127472987 127473008 ZNF263 JASPAR yes 5544682
chr3 127472987 127473008 ZNF263 JASPAR yes 71047229
chr3 127472990 127473011 ZNF263 JASPAR yes 5544683
chr3 127472990 127473011 ZNF263 JASPAR yes 71047230
chr3 127472997 127473008 FLI1 JASPAR yes 5544684
chr3 127472997 127473008 FLI1 JASPAR yes 71047231
chr3 127473008 127473014 NFIC JASPAR yes 5544685
chr3 127473008 127473014 NFIC JASPAR yes 71047232
chr3 127473014 127473018 LFA1 TRANSFAC yes 5544686
chr3 127473014 127473018 LFA1 TRANSFAC yes 71047233
chr3 127473018 127473029 NFKB1 JASPAR yes 5544687
chr3 127473018 127473029 NFKB1 JASPAR yes 71047234
chr3 127473018 127473031 NFKB1 JASPAR yes 5544688
chr3 127473018 127473031 NFKB2 JASPAR yes 5544689
chr3 127473018 127473031 NFKB1 JASPAR yes 71047235
chr3 127473018 127473031 NFKB2 JASPAR yes 71047236
chr3 127473019 127473029 NFKB1 JASPAR yes 5544690
chr3 127473019 127473029 RELA JASPAR yes 5544691
chr3 127473019 127473029 NFKB1 JASPAR yes 71047237
chr3 127473019 127473029 RELA JASPAR yes 71047238
chr3 127473019 127473030 NFKB1 JASPAR yes 5544692
chr3 127473019 127473030 NFKB1 JASPAR yes 71047239
chr3 127473033 127473048 HNF4G JASPAR yes 5544693
chr3 127473033 127473048 HNF4G JASPAR yes 71047240
chr3 127473034 127473048 NR2F1 JASPAR yes 5544694
chr3 127473034 127473048 NR2F1 JASPAR yes 71047241
chr3 127473034 127473049 HNF4A JASPAR yes 5544695
chr3 127473034 127473049 HNF4A JASPAR yes 71047242
chr3 127473039 127473052 NR2F1 JASPAR yes 5544696
chr3 127473039 127473052 NR2F1 JASPAR yes 71047243
chr3 127473041 127473049 NR4A2 JASPAR yes 5544697
chr3 127473041 127473049 NR4A2 JASPAR yes 71047244
chr3 127473043 127473047 ESR1 TRANSFAC yes 5544698
chr3 127473043 127473047 ESR1 TRANSFAC yes 71047245
chr3 127473049 127473065 ZNF143 JASPAR yes 5544699
chr3 127473049 127473065 ZNF143 JASPAR yes 71047246
chr3 127473054 127473073 PAX5 JASPAR yes 5544700
chr3 127473054 127473073 PAX5 JASPAR yes 71047247
chr3 127473065 127473070 SP1 TRANSFAC yes 5544701
chr3 127473065 127473070 SP1 TRANSFAC yes 71047248
chr3 127473073 127473079 MZF1 JASPAR yes 5544702
chr3 127473073 127473079 MZF1 JASPAR yes 71047249
chr3 127473124 127473137 EOMES JASPAR yes 5544703
chr3 127473124 127473137 EOMES JASPAR yes 71047250
chr3 127473125 127473135 TBR1 JASPAR yes 5544704
chr3 127473125 127473135 TBR1 JASPAR yes 71047251
chr3 127473138 127473156 SRF JASPAR yes 5544705
chr3 127473138 127473156 SRF JASPAR yes 71047252
chr3 127473139 127473157 SRF JASPAR yes 5544706
chr3 127473139 127473157 SRF JASPAR yes 71047253
chr3 127473162 127473170 MEIS2 JASPAR yes 5544707
chr3 127473162 127473170 MEIS3 JASPAR yes 5544708
chr3 127473162 127473170 MEIS2 JASPAR yes 71047254
chr3 127473162 127473170 MEIS3 JASPAR yes 71047255
chr3 127473163 127473167 NFE TRANSFAC yes 5544709
chr3 127473163 127473167 NFE TRANSFAC yes 71047256
chr3 127473166 127473176 ZNF740 JASPAR yes 5544710
chr3 127473166 127473176 ZNF740 JASPAR yes 71047257
chr3 127473167 127473187 RREB1 JASPAR yes 5544711
chr3 127473167 127473187 RREB1 JASPAR yes 71047258
chr3 127473173 127473191 SRF JASPAR yes 5544712
chr3 127473173 127473191 SRF JASPAR yes 71047259
chr3 127473175 127473186 CDX2 JASPAR yes 5544713
chr3 127473175 127473186 CDX2 JASPAR yes 71047260
chr3 127473176 127473188 SRF JASPAR yes 5544714
chr3 127473176 127473188 SRF JASPAR yes 71047261
chr3 127473177 127473186 CDX1 JASPAR yes 5544715
chr3 127473177 127473186 CDX1 JASPAR yes 71047262
chr3 127473185 127473206 IRF1 JASPAR yes 5544716
chr3 127473185 127473206 IRF1 JASPAR yes 71047263
chr3 127473189 127473203 SPIC JASPAR yes 5544717
chr3 127473189 127473203 SPIC JASPAR yes 71047264
chr3 127473189 127473210 IRF1 JASPAR yes 5544718
chr3 127473189 127473210 IRF1 JASPAR yes 71047265
chr3 127473191 127473212 IRF1 JASPAR yes 5544719
chr3 127473191 127473212 IRF1 JASPAR yes 71047266
chr3 127473195 127473210 FOXP1 JASPAR yes 5544720
chr3 127473195 127473210 FOXP1 JASPAR yes 71047267
chr3 127473195 127473216 IRF1 JASPAR yes 5544721
chr3 127473195 127473216 IRF1 JASPAR yes 71047268
chr3 127473196 127473211 FOXP1 JASPAR yes 5544722
chr3 127473196 127473211 FOXP1 JASPAR yes 71047269
chr3 127473196 127473217 IRF1 JASPAR yes 5544723
chr3 127473196 127473217 IRF1 JASPAR yes 71047270
chr3 127473197 127473212 FOXP1 JASPAR yes 5544724
chr3 127473197 127473212 FOXP1 JASPAR yes 71047271
chr3 127473200 127473215 STAT2 JASPAR yes 5544725
chr3 127473200 127473215 STAT2 JASPAR yes 71047272
chr3 127473208 127473218 TFCP2 JASPAR yes 5544726
chr3 127473208 127473218 TFCP2 JASPAR yes 71047273
chr3 127473217 127473221 NFE TRANSFAC yes 5544727
chr3 127473217 127473221 NFE TRANSFAC yes 71047274
chr3 127473238 127473255 BCL6B JASPAR yes 5544728
chr3 127473238 127473255 BCL6B JASPAR yes 71047275
chr3 127473253 127473265 PROX1 JASPAR yes 5544729
chr3 127473253 127473265 PROX1 JASPAR yes 71047276
chr3 127473259 127473274 STAT1 JASPAR yes 5544730
chr3 127473259 127473274 STAT1 JASPAR yes 71047277
chr3 127473261 127473272 STAT1 JASPAR yes 5544731
chr3 127473261 127473272 STAT3 JASPAR yes 5544732
chr3 127473261 127473272 STAT1 JASPAR yes 71047278
chr3 127473261 127473272 STAT3 JASPAR yes 71047279
chr3 127473266 127473271 ETS2 TRANSFAC yes 5544733
chr3 127473266 127473271 ETS2 TRANSFAC yes 71047280
chr3 127473270 127473281 NFKB1 JASPAR yes 5544734
chr3 127473270 127473281 NFKB1 JASPAR yes 71047281
chr3 127473332 127473335 MYB TRANSFAC yes 5544735
chr3 127473332 127473335 MYB TRANSFAC yes 71047282
chr3 127473385 127473389 YY1 TRANSFAC yes 5544736
chr3 127473385 127473389 YY1 TRANSFAC yes 71047283
chr3 127473393 127473405 GLI2 JASPAR yes 5544737
chr3 127473393 127473405 GLI2 JASPAR yes 71047284
chr3 127473406 127473427 ZNF263 JASPAR yes 5544738
chr3 127473406 127473427 ZNF263 JASPAR yes 71047285
SNP sites on vista42328[chr3:127472997-127473428]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 127473040 rs139323467 C G
HNF4A HNF4G NR2F1
7014963
chr3 127473068 rs115955659 G A
PAX5 SP1
7014964
chr3 127473170 rs182530327 C T
MEIS2 MEIS3 RREB1 SRF ZNF740
7014965
chr3 127473172 rs187190480 C T
RREB1 SRF ZNF740
7014966
chr3 127473201 rs34543777 G GA
FOXP1 IRF1 SPIC SRF STAT2
7014967
chr3 127473201 rs397968205 G GA
FOXP1 IRF1 SPIC SRF STAT2
7014968
chr3 127473201 rs531716776 G GA
FOXP1 IRF1 SPIC SRF STAT2
7014969
chr3 127473204 rs72223831 A AG
FOXP1 IRF1 SRF STAT2
7014970
chr3 127473205 rs6776002 A G
FOXP1 IRF1 SRF STAT2
7014971
chr3 127473327 rs561425568 C T no 7014972
chr3 127473360 rs78161983 C T no 7014973
chr3 127473361 rs16830337 G A no 7014974
chr3 127473375 rs60479698 C G no 7014975
chr3 127473397 rs569413985 G A,T
GLI2
7014976
Genes possibly regulated by vista42328[chr3:127472997-127473428]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 127391778 127399768 + ABTB1 ENSG00000114626.13 127391778 0.82 1.0 4046 18781
chr3 127407909 127542051 - MGLL ENSG00000074416.9 127542051 0.85 0.99 4047 31377
Expression level of Genes
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miRNAs possibly regulated by vista42328[chr3:127472997-127473428]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results