EnhancerDB
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  3. rs531716776[chr3:127473201]
Enhancers that have rs531716776[chr3:127473201]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 127460425 127476155 enh7513
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
chr3 127472997 127473428 vista42328
VISTA
Transcript factors that have rs531716776[chr3:127473201]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 127473069 127473274 SRF UCSC Txn Factor no Conserved 108530249
chr3 127473185 127473206 IRF1 JASPAR yes 5544716
chr3 127473185 127473206 IRF1 JASPAR yes 71047263
chr3 127473189 127473203 SPIC JASPAR yes 5544717
chr3 127473189 127473203 SPIC JASPAR yes 71047264
chr3 127473189 127473210 IRF1 JASPAR yes 5544718
chr3 127473189 127473210 IRF1 JASPAR yes 71047265
chr3 127473191 127473212 IRF1 JASPAR yes 5544719
chr3 127473191 127473212 IRF1 JASPAR yes 71047266
chr3 127473195 127473210 FOXP1 JASPAR yes 5544720
chr3 127473195 127473210 FOXP1 JASPAR yes 71047267
chr3 127473195 127473216 IRF1 JASPAR yes 5544721
chr3 127473195 127473216 IRF1 JASPAR yes 71047268
chr3 127473196 127473211 FOXP1 JASPAR yes 5544722
chr3 127473196 127473211 FOXP1 JASPAR yes 71047269
chr3 127473196 127473217 IRF1 JASPAR yes 5544723
chr3 127473196 127473217 IRF1 JASPAR yes 71047270
chr3 127473197 127473212 FOXP1 JASPAR yes 5544724
chr3 127473197 127473212 FOXP1 JASPAR yes 71047271
chr3 127473200 127473215 STAT2 JASPAR yes 5544725
chr3 127473200 127473215 STAT2 JASPAR yes 71047272
Genes associated with rs531716776[chr3:127473201], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More