EnhancerDB
  1. Home
  2. Enhancers
  3. vista42476[chr3:133295128-133295300]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42476[chr3:133295128-133295300]
Back to top
Tissue distribution of vista42476
Back to top
Transcription factor that possibly regulate vista42476[chr3:133295128-133295300]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 133295154 133295169 SCRT1 JASPAR yes 5840456
chr3 133295154 133295169 SCRT1 JASPAR yes 71053751
chr3 133295156 133295169 SCRT2 JASPAR yes 5840457
chr3 133295156 133295169 SCRT2 JASPAR yes 71053752
chr3 133295168 133295173 ETS2 TRANSFAC yes 5840458
chr3 133295168 133295173 ETS2 TRANSFAC yes 71053753
chr3 133295176 133295197 IRF1 JASPAR yes 5840459
chr3 133295176 133295197 IRF1 JASPAR yes 71053754
chr3 133295178 133295193 PRDM1 JASPAR yes 5840460
chr3 133295178 133295193 STAT2 JASPAR yes 5840461
chr3 133295178 133295193 PRDM1 JASPAR yes 71053755
chr3 133295178 133295193 STAT2 JASPAR yes 71053756
chr3 133295179 133295193 SPIC JASPAR yes 5840462
chr3 133295179 133295193 STAT1 JASPAR yes 5840463
chr3 133295179 133295193 SPIC JASPAR yes 71053757
chr3 133295179 133295193 STAT1 JASPAR yes 71053758
chr3 133295192 133295196 NFE TRANSFAC yes 5840464
chr3 133295192 133295196 NFE TRANSFAC yes 71053759
chr3 133295193 133295207 EBF1 JASPAR yes 5840465
chr3 133295193 133295207 EBF1 JASPAR yes 71053760
chr3 133295194 133295205 EBF1 JASPAR yes 5840466
chr3 133295194 133295205 EBF1 JASPAR yes 71053761
chr3 133295207 133295217 RORA JASPAR yes 5840467
chr3 133295207 133295217 RORA JASPAR yes 71053762
chr3 133295221 133295226 TFAP2A TRANSFAC yes 5840468
chr3 133295221 133295226 TFAP2A TRANSFAC yes 71053763
chr3 133295221 133295227 MZF1 JASPAR yes 5840469
chr3 133295221 133295227 MZF1 JASPAR yes 71053764
chr3 133295221 133295242 ZNF263 JASPAR yes 5840470
chr3 133295221 133295242 ZNF263 JASPAR yes 71053765
chr3 133295225 133295232 CEBPA TRANSFAC yes 5840471
chr3 133295225 133295232 CEBPA TRANSFAC yes 71053766
chr3 133295226 133295237 E2F6 JASPAR yes 5840472
chr3 133295226 133295237 E2F6 JASPAR yes 71053767
chr3 133295229 133295239 TEAD1 JASPAR yes 5840473
chr3 133295229 133295239 TEAD1 JASPAR yes 71053768
chr3 133295249 133295253 YY1 TRANSFAC yes 5840474
chr3 133295249 133295253 YY1 TRANSFAC yes 71053769
SNP sites on vista42476[chr3:133295128-133295300]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 133295177 rs186757204 T C
IRF1
7043063
chr3 133295185 rs13088006 T C
IRF1 PRDM1 SPIC STAT1 STAT2
7043064
chr3 133295195 rs111259706 G T
EBF1 IRF1 NFE
7043065
chr3 133295211 rs575848508 CCTGTAAATAATGGGGAGG C
RORA
7043066
chr3 133295230 rs560370379 AGG A
CEBPA E2F6 TEAD1 ZNF263
7043067
chr3 133295249 rs74673718 C A,G
YY1
7043068
Genes possibly regulated by vista42476[chr3:133295128-133295300]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 133292574 133309105 + CDV3 ENSG00000091527.11 133292574 0.7 0.99 4094 97446
chr3 133317019 133380737 - TOPBP1 ENSG00000163781.8 133380737 0.81 0.99 4095 14563
Expression level of Genes
Back to top
miRNAs possibly regulated by vista42476[chr3:133295128-133295300]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results