EnhancerDB
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  3. rs13088006[chr3:133295185]
Enhancers that have rs13088006[chr3:133295185]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 133293505 133302235 enh7553
Skin (Keratinocyte) Brain (SK-N-SH) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Thymus Heart
chr3 133295128 133295300 vista42476
VISTA
Transcript factors that have rs13088006[chr3:133295185]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 133295176 133295197 IRF1 JASPAR yes 5840459
chr3 133295176 133295197 IRF1 JASPAR yes 71053754
chr3 133295178 133295193 PRDM1 JASPAR yes 5840460
chr3 133295178 133295193 STAT2 JASPAR yes 5840461
chr3 133295178 133295193 PRDM1 JASPAR yes 71053755
chr3 133295178 133295193 STAT2 JASPAR yes 71053756
chr3 133295179 133295193 SPIC JASPAR yes 5840462
chr3 133295179 133295193 STAT1 JASPAR yes 5840463
chr3 133295179 133295193 SPIC JASPAR yes 71053757
chr3 133295179 133295193 STAT1 JASPAR yes 71053758
Genes associated with rs13088006[chr3:133295185], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More