EnhancerDB
  1. Home
  2. Enhancers
  3. vista42727[chr3:149104739-149105065]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42727[chr3:149104739-149105065]
Back to top
Tissue distribution of vista42727
Back to top
Transcription factor that possibly regulate vista42727[chr3:149104739-149105065]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 149102613 149105367 POLR2A UCSC Txn Factor no Conserved 108530644
chr3 149104298 149105035 REST UCSC Txn Factor no Conserved 108530645
chr3 149104365 149105226 EP300 UCSC Txn Factor no Conserved 108530646
chr3 149104459 149105148 TCF12 UCSC Txn Factor no Conserved 108530647
chr3 149104464 149105327 TCF7L2 UCSC Txn Factor no Conserved 108530648
chr3 149104669 149105105 NFIC UCSC Txn Factor no Conserved 108530649
chr3 149104715 149105136 MYBL2 UCSC Txn Factor no Conserved 108530650
chr3 149104717 149105006 SP1 UCSC Txn Factor no Conserved 108530651
chr3 149104726 149105035 FOXA2 UCSC Txn Factor no Conserved 108530652
chr3 149104742 149105045 FOXA1 UCSC Txn Factor no Conserved 108530653
chr3 149104743 149105039 HNF4A UCSC Txn Factor no Conserved 108530654
chr3 149104746 149104954 HNF4G UCSC Txn Factor no Conserved 108530655
chr3 149104749 149105107 FOSL2 UCSC Txn Factor no Conserved 108530656
chr3 149104753 149105079 BCL3 UCSC Txn Factor no Conserved 108530657
chr3 149104758 149105078 JUND UCSC Txn Factor no Conserved 108530658
chr3 149104767 149104780 SCRT2 JASPAR yes 6489104
chr3 149104767 149104780 SCRT2 JASPAR yes 71064849
chr3 149104786 149104796 FIGLA JASPAR yes 6489105
chr3 149104786 149104796 FIGLA JASPAR yes 71064850
chr3 149104796 149104801 MYC TRANSFAC yes 6489106
chr3 149104796 149104801 MYC TRANSFAC yes 71064851
chr3 149104796 149104809 NR2F1 JASPAR yes 6489107
chr3 149104796 149104809 NR2F1 JASPAR yes 71064852
chr3 149104798 149104809 ESRRB JASPAR yes 6489108
chr3 149104798 149104809 ESRRB JASPAR yes 71064853
chr3 149104799 149104807 NR4A2 JASPAR yes 6489109
chr3 149104799 149104807 NR4A2 JASPAR yes 71064854
chr3 149104803 149104811 EHF JASPAR yes 6489110
chr3 149104803 149104811 EHF JASPAR yes 71064855
chr3 149104805 149104810 ETS2 TRANSFAC yes 6489111
chr3 149104805 149104810 ETS2 TRANSFAC yes 71064856
chr3 149104809 149104819 MZF1 JASPAR yes 6489112
chr3 149104809 149104819 MZF1 JASPAR yes 71064857
chr3 149104817 149104823 PTF TRANSFAC yes 6489113
chr3 149104817 149104823 PTF TRANSFAC yes 71064858
chr3 149104837 149104851 TCF7L2 JASPAR yes 6489114
chr3 149104837 149104851 TCF7L2 JASPAR yes 71064859
chr3 149104840 149104846 LEF1 TRANSFAC yes 6489115
chr3 149104840 149104846 TCF4 TRANSFAC yes 6489116
chr3 149104840 149104846 LEF1 TRANSFAC yes 71064860
chr3 149104840 149104846 TCF4 TRANSFAC yes 71064861
chr3 149104861 149104873 SRF JASPAR yes 6489117
chr3 149104861 149104873 SRF JASPAR yes 71064862
chr3 149104874 149104888 NR2F1 JASPAR yes 6489118
chr3 149104874 149104888 NR2F1 JASPAR yes 71064863
chr3 149104889 149104901 FOXI1 JASPAR yes 6489119
chr3 149104889 149104901 FOXI1 JASPAR yes 71064864
chr3 149104896 149104901 MYC TRANSFAC yes 6489120
chr3 149104896 149104901 MYC TRANSFAC yes 71064865
chr3 149104908 149104913 H4TF1 TRANSFAC yes 6489121
chr3 149104908 149104913 H4TF1 TRANSFAC yes 71064866
chr3 149104909 149104917 FEV JASPAR yes 6489122
chr3 149104909 149104917 FEV JASPAR yes 71064867
chr3 149104915 149104921 MZF1 JASPAR yes 6489123
chr3 149104915 149104921 MZF1 JASPAR yes 71064868
chr3 149104938 149104956 MAFF JASPAR yes 6489124
chr3 149104938 149104956 MAFF JASPAR yes 71064869
chr3 149104939 149104942 MYB TRANSFAC yes 6489125
chr3 149104939 149104942 MYB TRANSFAC yes 71064870
chr3 149104940 149104961 MAFG JASPAR yes 6489126
chr3 149104940 149104961 MAFG JASPAR yes 71064871
chr3 149104941 149104955 JUN JASPAR yes 6489127
chr3 149104941 149104955 JUN JASPAR yes 71064872
chr3 149104943 149104954 BATF JASPAR yes 6489128
chr3 149104943 149104954 BATF JASPAR yes 71064873
chr3 149104944 149104955 JUNB JASPAR yes 6489129
chr3 149104944 149104955 NFE2L2 JASPAR yes 6489130
chr3 149104944 149104955 JUNB JASPAR yes 71064874
chr3 149104944 149104955 NFE2L2 JASPAR yes 71064875
chr3 149104945 149104956 FOS JASPAR yes 6489131
chr3 149104945 149104956 FOSL1 JASPAR yes 6489132
chr3 149104945 149104956 JUND JASPAR yes 6489133
chr3 149104945 149104956 NFE2 JASPAR yes 6489134
chr3 149104945 149104956 FOS JASPAR yes 71064876
chr3 149104945 149104956 FOSL1 JASPAR yes 71064877
chr3 149104945 149104956 JUND JASPAR yes 71064878
chr3 149104945 149104956 NFE2 JASPAR yes 71064879
chr3 149104946 149104955 JDP2 JASPAR yes 6489135
chr3 149104946 149104955 JDP2 JASPAR yes 71064880
chr3 149104946 149104957 FOSL2 JASPAR yes 6489136
chr3 149104946 149104957 JUNB JASPAR yes 6489137
chr3 149104946 149104957 FOSL2 JASPAR yes 71064881
chr3 149104946 149104957 JUNB JASPAR yes 71064882
chr3 149104946 149104960 JUN JASPAR yes 6489138
chr3 149104946 149104960 JUN JASPAR yes 71064883
chr3 149104947 149104958 BATF JASPAR yes 6489139
chr3 149104947 149104958 BATF JASPAR yes 71064884
chr3 149104977 149104989 TEF JASPAR yes 6489140
chr3 149104977 149104989 TEF JASPAR yes 71064885
chr3 149104981 149104992 NFIL3 JASPAR yes 6489141
chr3 149104981 149104992 NFIL3 JASPAR yes 71064886
chr3 149105000 149105016 RFX5 JASPAR yes 6489142
chr3 149105000 149105016 RFX5 JASPAR yes 71064887
chr3 149105012 149105025 ELF3 JASPAR yes 6489143
chr3 149105012 149105025 ELF3 JASPAR yes 71064888
chr3 149105013 149105024 SPDEF JASPAR yes 6489144
chr3 149105013 149105024 SPDEF JASPAR yes 71064889
chr3 149105017 149105027 MZF1 JASPAR yes 6489145
chr3 149105017 149105027 MZF1 JASPAR yes 71064890
chr3 149105020 149105031 NFKB1 JASPAR yes 6489146
chr3 149105020 149105031 NFKB1 JASPAR yes 71064891
chr3 149105021 149105031 RELA JASPAR yes 6489147
chr3 149105021 149105031 RELA JASPAR yes 71064892
chr3 149105025 149105046 IRF1 JASPAR yes 6489148
chr3 149105025 149105046 IRF1 JASPAR yes 71064893
chr3 149105039 149105054 MYBL2 JASPAR yes 6489149
chr3 149105039 149105054 MYBL2 JASPAR yes 71064894
SNP sites on vista42727[chr3:149104739-149105065]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 149104849 rs2059991 C T
BCL3 EP300 FOSL2 FOXA1 FOXA2 HNF4A HNF4G JUND MYBL2 NFIC POLR2A REST SP1 TCF12 TCF7L2
7101009
chr3 149104901 rs2059992 G A
BCL3 EP300 FOSL2 FOXA1 FOXA2 FOXI1 HNF4A HNF4G JUND MYBL2 MYC NFIC POLR2A REST SP1 TCF12 TCF7L2
7101010
chr3 149104944 rs546870665 T C
BATF BCL3 EP300 FOSL2 FOXA1 FOXA2 HNF4A HNF4G JUN JUNB JUND MAFF MAFG MYBL2 NFE2L2 NFIC POLR2A REST SP1 TCF12 TCF7L2
7101011
chr3 149104946 rs9812711 G C
BATF BCL3 EP300 FOS FOSL1 FOSL2 FOXA1 FOXA2 HNF4A HNF4G JDP2 JUN JUNB JUND MAFF MAFG MYBL2 NFE2 NFE2L2 NFIC POLR2A REST SP1 TCF12 TCF7L2
7101012
chr3 149104966 rs116500684 C T
BCL3 EP300 FOSL2 FOXA1 FOXA2 HNF4A JUND MYBL2 NFIC POLR2A REST SP1 TCF12 TCF7L2
7101013
chr3 149104975 rs73867315 T C
BCL3 EP300 FOSL2 FOXA1 FOXA2 HNF4A JUND MYBL2 NFIC POLR2A REST SP1 TCF12 TCF7L2
7101014
chr3 149105018 rs187480997 G A
BCL3 ELF3 EP300 FOSL2 FOXA1 FOXA2 HNF4A JUND MYBL2 MZF1 NFIC POLR2A REST SPDEF TCF12 TCF7L2
7101015
Genes possibly regulated by vista42727[chr3:149104739-149105065]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 149036285 149052201 - TM4SF18 ENSG00000163762.2 149052201 0.82 0.96 4173 47462
chr3 149086809 149095652 - TM4SF1 ENSG00000169908.6 149095652 0.82 0.88 4174 90913
chr3 149191761 149221068 + TM4SF4 ENSG00000169903.6 149191761 0.99 1.0 4175 13304
Expression level of Genes
Back to top
miRNAs possibly regulated by vista42727[chr3:149104739-149105065]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results