EnhancerDB
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  3. rs2059992[chr3:149104901]
Enhancers that have rs2059992[chr3:149104901]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149097815 149115835 enh21019
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Heart
chr3 149104739 149105065 vista42727
VISTA
Transcript factors that have rs2059992[chr3:149104901]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149102613 149105367 POLR2A UCSC Txn Factor no Conserved 108530644
chr3 149104298 149105035 REST UCSC Txn Factor no Conserved 108530645
chr3 149104365 149105226 EP300 UCSC Txn Factor no Conserved 108530646
chr3 149104459 149105148 TCF12 UCSC Txn Factor no Conserved 108530647
chr3 149104464 149105327 TCF7L2 UCSC Txn Factor no Conserved 108530648
chr3 149104669 149105105 NFIC UCSC Txn Factor no Conserved 108530649
chr3 149104715 149105136 MYBL2 UCSC Txn Factor no Conserved 108530650
chr3 149104717 149105006 SP1 UCSC Txn Factor no Conserved 108530651
chr3 149104726 149105035 FOXA2 UCSC Txn Factor no Conserved 108530652
chr3 149104742 149105045 FOXA1 UCSC Txn Factor no Conserved 108530653
chr3 149104743 149105039 HNF4A UCSC Txn Factor no Conserved 108530654
chr3 149104746 149104954 HNF4G UCSC Txn Factor no Conserved 108530655
chr3 149104749 149105107 FOSL2 UCSC Txn Factor no Conserved 108530656
chr3 149104753 149105079 BCL3 UCSC Txn Factor no Conserved 108530657
chr3 149104758 149105078 JUND UCSC Txn Factor no Conserved 108530658
chr3 149104889 149104901 FOXI1 JASPAR yes 6489119
chr3 149104889 149104901 FOXI1 JASPAR yes 71064864
chr3 149104896 149104901 MYC TRANSFAC yes 6489120
chr3 149104896 149104901 MYC TRANSFAC yes 71064865
Genes associated with rs2059992[chr3:149104901], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More