EnhancerDB
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  3. vista4305[chr1:186728961-186729222]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4305[chr1:186728961-186729222]
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Tissue distribution of vista4305
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Transcription factor that possibly regulate vista4305[chr1:186728961-186729222]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 186728956 186728966 NFIA JASPAR yes 33893604
chr1 186728956 186728966 NFIA JASPAR yes 118419257
chr1 186728958 186728964 NFIC JASPAR yes 33893605
chr1 186728958 186728964 NFIC JASPAR yes 118419258
chr1 186728961 186728976 FOXP1 JASPAR yes 33893606
chr1 186728961 186728976 FOXP1 JASPAR yes 118419259
chr1 186728962 186728977 FOXP1 JASPAR yes 33893607
chr1 186728962 186728977 FOXP1 JASPAR yes 118419260
chr1 186728962 186728983 IRF1 JASPAR yes 33893608
chr1 186728962 186728983 IRF1 JASPAR yes 118419261
chr1 186728963 186728978 FOXP1 JASPAR yes 33893609
chr1 186728963 186728978 FOXP1 JASPAR yes 118419262
chr1 186728963 186728984 IRF1 JASPAR yes 33893610
chr1 186728963 186728984 IRF1 JASPAR yes 118419263
chr1 186728964 186728979 FOXP1 JASPAR yes 33893611
chr1 186728964 186728979 FOXP1 JASPAR yes 118419264
chr1 186728964 186728985 IRF1 JASPAR yes 33893612
chr1 186728964 186728985 IRF1 JASPAR yes 118419265
chr1 186728965 186728980 FOXP1 JASPAR yes 33893613
chr1 186728965 186728980 FOXP1 JASPAR yes 118419266
chr1 186728965 186728986 IRF1 JASPAR yes 33893614
chr1 186728965 186728986 IRF1 JASPAR yes 118419267
chr1 186728966 186728981 FOXP1 JASPAR yes 33893615
chr1 186728966 186728981 FOXP1 JASPAR yes 118419268
chr1 186728966 186728987 IRF1 JASPAR yes 33893616
chr1 186728966 186728987 IRF1 JASPAR yes 118419269
chr1 186728967 186728982 FOXP1 JASPAR yes 33893617
chr1 186728967 186728982 FOXP1 JASPAR yes 118419270
chr1 186728967 186728988 IRF1 JASPAR yes 33893618
chr1 186728967 186728988 IRF1 JASPAR yes 118419271
chr1 186728968 186728983 FOXP1 JASPAR yes 33893619
chr1 186728968 186728983 FOXP1 JASPAR yes 118419272
chr1 186728968 186728989 IRF1 JASPAR yes 33893620
chr1 186728968 186728989 IRF1 JASPAR yes 118419273
chr1 186728969 186728984 FOXP1 JASPAR yes 33893621
chr1 186728969 186728984 FOXP1 JASPAR yes 118419274
chr1 186728969 186728990 IRF1 JASPAR yes 33893622
chr1 186728969 186728990 IRF1 JASPAR yes 118419275
chr1 186728970 186728985 FOXP1 JASPAR yes 33893623
chr1 186728970 186728985 FOXP1 JASPAR yes 118419276
chr1 186728972 186728987 FOXP1 JASPAR yes 33893624
chr1 186728972 186728987 FOXP1 JASPAR yes 118419277
chr1 186728985 186729000 JUND JASPAR yes 33893625
chr1 186728985 186729000 JUND JASPAR yes 118419278
chr1 186728986 186728999 JUN JASPAR yes 33893626
chr1 186728986 186728999 JUN JASPAR yes 118419279
chr1 186729035 186729038 MYB TRANSFAC yes 33893627
chr1 186729035 186729038 MYB TRANSFAC yes 118419280
chr1 186729038 186729042 H1TF2 TRANSFAC yes 33893628
chr1 186729038 186729042 NFE TRANSFAC yes 33893629
chr1 186729038 186729042 SRF TRANSFAC yes 33893630
chr1 186729038 186729042 H1TF2 TRANSFAC yes 118419281
chr1 186729038 186729042 NFE TRANSFAC yes 118419282
chr1 186729038 186729042 SRF TRANSFAC yes 118419283
chr1 186729066 186729070 NFE TRANSFAC yes 33893631
chr1 186729066 186729070 NFE TRANSFAC yes 118419284
chr1 186729074 186729083 SRY JASPAR yes 33893632
chr1 186729074 186729083 SRY JASPAR yes 118419285
chr1 186729085 186729089 YY1 TRANSFAC yes 33893633
chr1 186729085 186729089 YY1 TRANSFAC yes 118419286
chr1 186729090 186729096 TCF4 TRANSFAC yes 33893634
chr1 186729090 186729096 TCF4 TRANSFAC yes 118419287
chr1 186729111 186729117 LEF1 TRANSFAC yes 33893635
chr1 186729111 186729117 SOX10 JASPAR yes 33893636
chr1 186729111 186729117 LEF1 TRANSFAC yes 118419288
chr1 186729111 186729117 SOX10 JASPAR yes 118419289
chr1 186729117 186729127 POU6F2 JASPAR yes 33893637
chr1 186729117 186729127 POU6F2 JASPAR yes 118419290
chr1 186729118 186729128 GSX1 JASPAR yes 33893638
chr1 186729118 186729128 GSX1 JASPAR yes 118419291
chr1 186729119 186729127 NKX6-1 JASPAR yes 33893639
chr1 186729119 186729127 NKX6-2 JASPAR yes 33893640
chr1 186729119 186729127 NKX6-1 JASPAR yes 118419292
chr1 186729119 186729127 NKX6-2 JASPAR yes 118419293
chr1 186729121 186729125 YY1 TRANSFAC yes 33893641
chr1 186729121 186729125 YY1 TRANSFAC yes 118419294
chr1 186729130 186729143 ZBTB18 JASPAR yes 33893642
chr1 186729130 186729143 ZBTB18 JASPAR yes 118419295
chr1 186729142 186729155 ZBTB18 JASPAR yes 33893643
chr1 186729142 186729155 ZBTB18 JASPAR yes 118419296
chr1 186729154 186729159 TFAP2A TRANSFAC yes 33893644
chr1 186729154 186729159 TFAP2A TRANSFAC yes 118419297
chr1 186729154 186729160 MZF1 JASPAR yes 33893645
chr1 186729154 186729160 MZF1 JASPAR yes 118419298
chr1 186729154 186729175 ZNF263 JASPAR yes 33893646
chr1 186729154 186729175 ZNF263 JASPAR yes 118419299
chr1 186729155 186729165 SP1 JASPAR yes 33893647
chr1 186729155 186729165 SP1 JASPAR yes 118419300
chr1 186729156 186729168 INSM1 JASPAR yes 33893648
chr1 186729156 186729168 INSM1 JASPAR yes 118419301
chr1 186729163 186729167 LFA1 TRANSFAC yes 33893649
chr1 186729163 186729167 LFA1 TRANSFAC yes 118419302
chr1 186729167 186729172 ETS2 TRANSFAC yes 33893650
chr1 186729167 186729172 ETS2 TRANSFAC yes 118419303
chr1 186729167 186729175 EHF JASPAR yes 33893651
chr1 186729167 186729175 EHF JASPAR yes 118419304
chr1 186729190 186729211 IRF1 JASPAR yes 33893652
chr1 186729190 186729211 IRF1 JASPAR yes 118419305
chr1 186729195 186729215 RREB1 JASPAR yes 33893653
chr1 186729195 186729215 RREB1 JASPAR yes 118419306
chr1 186729195 186729216 IRF1 JASPAR yes 33893654
chr1 186729195 186729216 IRF1 JASPAR yes 118419307
chr1 186729196 186729202 TCF4 TRANSFAC yes 33893655
chr1 186729196 186729202 TCF4 TRANSFAC yes 118419308
chr1 186729196 186729211 FOXP1 JASPAR yes 33893656
chr1 186729196 186729211 FOXP1 JASPAR yes 118419309
chr1 186729196 186729217 IRF1 JASPAR yes 33893657
chr1 186729196 186729217 IRF1 JASPAR yes 118419310
chr1 186729197 186729208 FOXP2 JASPAR yes 33893658
chr1 186729197 186729208 FOXP2 JASPAR yes 118419311
chr1 186729197 186729209 FOXC2 JASPAR yes 33893659
chr1 186729197 186729209 FOXC2 JASPAR yes 118419312
chr1 186729198 186729213 FOXP1 JASPAR yes 33893660
chr1 186729198 186729213 FOXP1 JASPAR yes 118419313
chr1 186729200 186729221 IRF1 JASPAR yes 33893661
chr1 186729200 186729221 IRF1 JASPAR yes 118419314
chr1 186729201 186729222 IRF1 JASPAR yes 33893662
chr1 186729201 186729222 IRF1 JASPAR yes 118419315
chr1 186729202 186729217 FOXP1 JASPAR yes 33893663
chr1 186729202 186729217 FOXP1 JASPAR yes 118419316
chr1 186729207 186729213 TCF4 TRANSFAC yes 33893664
chr1 186729207 186729213 TCF4 TRANSFAC yes 118419317
chr1 186729207 186729222 FOXP1 JASPAR yes 33893665
chr1 186729207 186729222 FOXP1 JASPAR yes 118419318
chr1 186729208 186729219 FOXP2 JASPAR yes 33893666
chr1 186729208 186729219 FOXP2 JASPAR yes 118419319
SNP sites on vista4305[chr1:186728961-186729222]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 186728963 rs562427570 CA C
FOXP1 IRF1 NFIA NFIC
800582
chr1 186729015 rs534029576 T C no 800583
chr1 186729019 rs10489400 C T no 800584
chr1 186729040 rs577024760 C A
H1TF2 NFE SRF
800585
chr1 186729054 rs145974087 T G no 800586
chr1 186729157 rs181203737 G C
INSM1 MZF1 SP1 TFAP2A ZNF263
800587
chr1 186729186 rs143776195 A T no 800588
chr1 186729211 rs531442366 TG T
FOXP1 FOXP2 IRF1 RREB1 TCF4
800589
chr1 186729212 rs371639757 G T
FOXP1 FOXP2 IRF1 RREB1 TCF4
800590
Genes possibly regulated by vista4305[chr1:186728961-186729222]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 186640923 186649559 - PTGS2 ENSG00000073756.7 186649559 0.91 0.95 1661 20598
chr1 186798085 186958113 + PLA2G4A ENSG00000116711.8 186798085 0.7 0.98 1662 31137
Expression level of Genes
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miRNAs possibly regulated by vista4305[chr1:186728961-186729222]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results