EnhancerDB
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  3. rs562427570[chr1:186728963]
Enhancers that have rs562427570[chr1:186728963]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 186717505 186734635 enh27331
Astrocyte Prostate (PC-3) Peripheral Blood (MM.1S) Cervix (HeLa-S3)
chr1 186728961 186729222 vista4305
VISTA
Transcript factors that have rs562427570[chr1:186728963]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 186728956 186728966 NFIA JASPAR yes 33893604
chr1 186728956 186728966 NFIA JASPAR yes 118419257
chr1 186728958 186728964 NFIC JASPAR yes 33893605
chr1 186728958 186728964 NFIC JASPAR yes 118419258
chr1 186728961 186728976 FOXP1 JASPAR yes 33893606
chr1 186728961 186728976 FOXP1 JASPAR yes 118419259
chr1 186728962 186728977 FOXP1 JASPAR yes 33893607
chr1 186728962 186728977 FOXP1 JASPAR yes 118419260
chr1 186728962 186728983 IRF1 JASPAR yes 33893608
chr1 186728962 186728983 IRF1 JASPAR yes 118419261
chr1 186728963 186728978 FOXP1 JASPAR yes 33893609
chr1 186728963 186728978 FOXP1 JASPAR yes 118419262
chr1 186728963 186728984 IRF1 JASPAR yes 33893610
chr1 186728963 186728984 IRF1 JASPAR yes 118419263
Genes associated with rs562427570[chr1:186728963], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More