EnhancerDB
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  3. vista43550[chr3:188017658-188018009]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43550[chr3:188017658-188018009]
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Tissue distribution of vista43550
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Transcription factor that possibly regulate vista43550[chr3:188017658-188018009]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 188017660 188017664 NFE TRANSFAC yes 8469078
chr3 188017660 188017664 NFE TRANSFAC yes 71103837
chr3 188017660 188017673 SMAD2 JASPAR yes 8469079
chr3 188017660 188017673 SMAD2 JASPAR yes 71103838
chr3 188017664 188017668 NFE TRANSFAC yes 8469080
chr3 188017664 188017668 NFE TRANSFAC yes 71103839
chr3 188017667 188017678 EBF1 JASPAR yes 8469081
chr3 188017667 188017678 EBF1 JASPAR yes 71103840
chr3 188017707 188017718 FOSL2 JASPAR yes 8469082
chr3 188017707 188017718 FOSL2 JASPAR yes 71103841
chr3 188017732 188017738 TCF4 TRANSFAC yes 8469083
chr3 188017732 188017738 TCF4 TRANSFAC yes 71103842
chr3 188017740 188017755 FOXP1 JASPAR yes 8469084
chr3 188017740 188017755 FOXP1 JASPAR yes 71103843
chr3 188017741 188017752 FOXA1 JASPAR yes 8469085
chr3 188017741 188017752 FOXA1 JASPAR yes 71103844
chr3 188017741 188017756 FOXA1 JASPAR yes 8469086
chr3 188017741 188017756 FOXA1 JASPAR yes 71103845
chr3 188017743 188017754 FOXP2 JASPAR yes 8469087
chr3 188017743 188017754 FOXP2 JASPAR yes 71103846
chr3 188017744 188017752 FOXO3 JASPAR yes 8469088
chr3 188017744 188017752 FOXO3 JASPAR yes 71103847
chr3 188017745 188017752 FOXD2 JASPAR yes 8469089
chr3 188017745 188017752 FOXI1 JASPAR yes 8469090
chr3 188017745 188017752 FOXL1 JASPAR yes 8469091
chr3 188017745 188017752 FOXO4 JASPAR yes 8469092
chr3 188017745 188017752 FOXO6 JASPAR yes 8469093
chr3 188017745 188017752 FOXP3 JASPAR yes 8469094
chr3 188017745 188017752 FOXD2 JASPAR yes 71103848
chr3 188017745 188017752 FOXI1 JASPAR yes 71103849
chr3 188017745 188017752 FOXL1 JASPAR yes 71103850
chr3 188017745 188017752 FOXO4 JASPAR yes 71103851
chr3 188017745 188017752 FOXO6 JASPAR yes 71103852
chr3 188017745 188017752 FOXP3 JASPAR yes 71103853
chr3 188017745 188017753 FOXD1 JASPAR yes 8469095
chr3 188017745 188017753 FOXO3 JASPAR yes 8469096
chr3 188017745 188017753 FOXD1 JASPAR yes 71103854
chr3 188017745 188017753 FOXO3 JASPAR yes 71103855
chr3 188017749 188017767 NR3C1 JASPAR yes 8469097
chr3 188017749 188017767 NR3C1 JASPAR yes 71103856
chr3 188017751 188017769 NR3C1 JASPAR yes 8469098
chr3 188017751 188017769 NR3C1 JASPAR yes 71103857
chr3 188017760 188017768 EHF JASPAR yes 8469099
chr3 188017760 188017768 EHF JASPAR yes 71103858
chr3 188017766 188017770 YY1 TRANSFAC yes 8469100
chr3 188017766 188017770 YY1 TRANSFAC yes 71103859
chr3 188017780 188017786 SOX10 JASPAR yes 8469101
chr3 188017780 188017786 SOX10 JASPAR yes 71103860
chr3 188017797 188017812 MEF2C JASPAR yes 8469102
chr3 188017797 188017812 MEF2C JASPAR yes 71103861
chr3 188017807 188017825 NR3C1 JASPAR yes 8469103
chr3 188017807 188017825 NR3C1 JASPAR yes 71103862
chr3 188017816 188017820 YY1 TRANSFAC yes 8469104
chr3 188017816 188017820 YY1 TRANSFAC yes 71103863
chr3 188017822 188017838 POU4F3 JASPAR yes 8469105
chr3 188017822 188017838 POU4F3 JASPAR yes 71103864
chr3 188017827 188017845 IRF2 JASPAR yes 8469106
chr3 188017827 188017845 IRF2 JASPAR yes 71103865
chr3 188017828 188017839 CEBPA JASPAR yes 8469107
chr3 188017828 188017839 CEBPA JASPAR yes 71103866
chr3 188017832 188017838 TCF4 TRANSFAC yes 8469108
chr3 188017832 188017838 TCF4 TRANSFAC yes 71103867
chr3 188017848 188017858 MEF2A JASPAR yes 8469109
chr3 188017848 188017858 MEF2A JASPAR yes 71103868
chr3 188017878 188017891 POU3F3 JASPAR yes 8469110
chr3 188017878 188017891 POU3F3 JASPAR yes 71103869
chr3 188017878 188017892 POU1F1 JASPAR yes 8469111
chr3 188017878 188017892 POU1F1 JASPAR yes 71103870
chr3 188017879 188017892 POU2F2 JASPAR yes 8469112
chr3 188017879 188017892 POU2F2 JASPAR yes 71103871
chr3 188017881 188017895 IRF7 JASPAR yes 8469113
chr3 188017881 188017895 IRF7 JASPAR yes 71103872
chr3 188017884 188017899 MEF2C JASPAR yes 8469114
chr3 188017884 188017899 MEF2C JASPAR yes 71103873
chr3 188017885 188017897 POU3F1 JASPAR yes 8469115
chr3 188017885 188017897 POU3F2 JASPAR yes 8469116
chr3 188017885 188017897 POU3F1 JASPAR yes 71103874
chr3 188017885 188017897 POU3F2 JASPAR yes 71103875
chr3 188017885 188017898 POU3F3 JASPAR yes 8469117
chr3 188017885 188017898 POU3F3 JASPAR yes 71103876
chr3 188017886 188017898 POU2F1 JASPAR yes 8469118
chr3 188017886 188017898 POU2F1 JASPAR yes 71103877
chr3 188017894 188017897 MYB TRANSFAC yes 8469119
chr3 188017894 188017897 MYB TRANSFAC yes 71103878
chr3 188017898 188017908 EMX1 JASPAR yes 8469120
chr3 188017898 188017908 HOXB3 JASPAR yes 8469121
chr3 188017898 188017908 NOTO JASPAR yes 8469122
chr3 188017898 188017908 EMX1 JASPAR yes 71103879
chr3 188017898 188017908 HOXB3 JASPAR yes 71103880
chr3 188017898 188017908 NOTO JASPAR yes 71103881
chr3 188017924 188017933 SOX9 JASPAR yes 8469123
chr3 188017924 188017933 SOX9 JASPAR yes 71103882
chr3 188017929 188017944 MEF2A JASPAR yes 8469124
chr3 188017929 188017944 MEF2A JASPAR yes 71103883
chr3 188017930 188017945 MEF2C JASPAR yes 8469125
chr3 188017930 188017945 MEF2C JASPAR yes 71103884
chr3 188017932 188017946 POU1F1 JASPAR yes 8469126
chr3 188017932 188017946 POU1F1 JASPAR yes 71103885
chr3 188017942 188017946 YY1 TRANSFAC yes 8469127
chr3 188017942 188017946 YY1 TRANSFAC yes 71103886
chr3 188017980 188017995 FOXA1 JASPAR yes 8469128
chr3 188017980 188017995 FOXA1 JASPAR yes 71103887
chr3 188017981 188017993 FOXI1 JASPAR yes 8469129
chr3 188017981 188017993 FOXI1 JASPAR yes 71103888
chr3 188017981 188017996 FOXP1 JASPAR yes 8469130
chr3 188017981 188017996 FOXP1 JASPAR yes 71103889
chr3 188017982 188017993 FOXP2 JASPAR yes 8469131
chr3 188017982 188017993 FOXP2 JASPAR yes 71103890
chr3 188017982 188017994 FOXC2 JASPAR yes 8469132
chr3 188017982 188017994 FOXC2 JASPAR yes 71103891
chr3 188017982 188017996 FOXF2 JASPAR yes 8469133
chr3 188017982 188017996 FOXF2 JASPAR yes 71103892
chr3 188017983 188017991 FOXG1 JASPAR yes 8469134
chr3 188017983 188017991 FOXG1 JASPAR yes 71103893
chr3 188017984 188017995 FOXA1 JASPAR yes 8469135
chr3 188017984 188017995 FOXA1 JASPAR yes 71103894
chr3 188017986 188017998 FOXC2 JASPAR yes 8469136
chr3 188017986 188017998 FOXC2 JASPAR yes 71103895
chr3 188017987 188018008 IRF1 JASPAR yes 8469137
chr3 188017987 188018008 IRF1 JASPAR yes 71103896
chr3 188017988 188017992 YY1 TRANSFAC yes 8469138
chr3 188017988 188017992 YY1 TRANSFAC yes 71103897
chr3 188017989 188018004 FOXP1 JASPAR yes 8469139
chr3 188017989 188018004 FOXP1 JASPAR yes 71103898
chr3 188017989 188018010 IRF1 JASPAR yes 8469140
chr3 188017989 188018010 IRF1 JASPAR yes 71103899
chr3 188017994 188018009 FOXP1 JASPAR yes 8469141
chr3 188017994 188018009 FOXP1 JASPAR yes 71103900
chr3 188017997 188018017 RREB1 JASPAR yes 8469142
chr3 188017997 188018017 RREB1 JASPAR yes 71103901
chr3 188017999 188018019 RREB1 JASPAR yes 8469143
chr3 188017999 188018019 RREB1 JASPAR yes 71103902
chr3 188018008 188018020 FOXI1 JASPAR yes 8469144
chr3 188018008 188018020 FOXI1 JASPAR yes 71103903
SNP sites on vista43550[chr3:188017658-188018009]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 188017659 rs534450072 T C no 7274166
chr3 188017675 rs73061529 A C
EBF1
7274167
chr3 188017714 rs73061532 C A
FOSL2
7274168
chr3 188017767 rs76169114 T C
EHF NR3C1 YY1
7274169
chr3 188017962 rs150945410 C CT no 7274170
chr3 188017983 rs556190957 TG T
FOXA1 FOXC2 FOXF2 FOXG1 FOXI1 FOXP1 FOXP2
7274171
chr3 188017986 rs540058024 G T
FOXA1 FOXC2 FOXF2 FOXG1 FOXI1 FOXP1 FOXP2
7274172
chr3 188017990 rs546857183 A T
FOXA1 FOXC2 FOXF2 FOXG1 FOXI1 FOXP1 FOXP2 IRF1 YY1
7274173
Genes possibly regulated by vista43550[chr3:188017658-188018009]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista43550[chr3:188017658-188018009]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results