EnhancerDB
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  3. vista43630[chr3:189793562-189793947]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43630[chr3:189793562-189793947]
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Tissue distribution of vista43630
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Transcription factor that possibly regulate vista43630[chr3:189793562-189793947]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 189793566 189793572 GATA3 JASPAR yes 8618242
chr3 189793566 189793572 GATA3 JASPAR yes 71107602
chr3 189793576 189793580 ESR1 TRANSFAC yes 8618243
chr3 189793576 189793580 ESR1 TRANSFAC yes 71107603
chr3 189793615 189793628 ZBTB18 JASPAR yes 8618244
chr3 189793615 189793628 ZBTB18 JASPAR yes 71107604
chr3 189793638 189793653 ZIC4 JASPAR yes 8618245
chr3 189793638 189793653 ZIC4 JASPAR yes 71107605
chr3 189793638 189793656 NR3C1 JASPAR yes 8618246
chr3 189793638 189793656 NR3C1 JASPAR yes 71107606
chr3 189793639 189793653 ZIC1 JASPAR yes 8618247
chr3 189793639 189793653 ZIC1 JASPAR yes 71107607
chr3 189793651 189793655 YY1 TRANSFAC yes 8618248
chr3 189793651 189793655 YY1 TRANSFAC yes 71107608
chr3 189793657 189793664 SPIB JASPAR yes 8618249
chr3 189793657 189793664 SPIB JASPAR yes 71107609
chr3 189793668 189793681 DUXA JASPAR yes 8618250
chr3 189793668 189793681 DUXA JASPAR yes 71107610
chr3 189793669 189793680 DUX4 JASPAR yes 8618251
chr3 189793669 189793680 PHOX2A JASPAR yes 8618252
chr3 189793669 189793680 DUX4 JASPAR yes 71107611
chr3 189793669 189793680 PHOX2A JASPAR yes 71107612
chr3 189793671 189793676 MYB TRANSFAC yes 8618253
chr3 189793671 189793676 MYB TRANSFAC yes 71107613
chr3 189793681 189793697 POU4F2 JASPAR yes 8618254
chr3 189793681 189793697 POU4F3 JASPAR yes 8618255
chr3 189793681 189793697 POU4F2 JASPAR yes 71107614
chr3 189793681 189793697 POU4F3 JASPAR yes 71107615
chr3 189793683 189793687 YY1 TRANSFAC yes 8618256
chr3 189793683 189793687 YY1 TRANSFAC yes 71107616
chr3 189793683 189793697 POU4F1 JASPAR yes 8618257
chr3 189793683 189793697 POU4F1 JASPAR yes 71107617
chr3 189793687 189793693 HiNF-A TRANSFAC yes 8618258
chr3 189793687 189793693 HiNF-A TRANSFAC yes 71107618
chr3 189793697 189793700 MYB TRANSFAC yes 8618259
chr3 189793697 189793700 MYB TRANSFAC yes 71107619
chr3 189793711 189793714 MYB TRANSFAC yes 8618260
chr3 189793711 189793714 MYB TRANSFAC yes 71107620
chr3 189793728 189793739 DMRT3 JASPAR yes 8618261
chr3 189793728 189793739 DMRT3 JASPAR yes 71107621
chr3 189793755 189793766 STAT1 JASPAR yes 8618262
chr3 189793755 189793766 STAT1 JASPAR yes 71107622
chr3 189793757 189793768 ELF5 JASPAR yes 8618263
chr3 189793757 189793768 ELF5 JASPAR yes 71107623
chr3 189793759 189793767 FEV JASPAR yes 8618264
chr3 189793759 189793767 FEV JASPAR yes 71107624
chr3 189793777 189793783 SOX10 JASPAR yes 8618265
chr3 189793777 189793783 SOX10 JASPAR yes 71107625
chr3 189793789 189793808 RFX2 JASPAR yes 8618266
chr3 189793789 189793808 RFX2 JASPAR yes 71107626
chr3 189793791 189793806 RFX5 JASPAR yes 8618267
chr3 189793791 189793806 RFX5 JASPAR yes 71107627
chr3 189793799 189793802 MYB TRANSFAC yes 8618268
chr3 189793799 189793802 MYB TRANSFAC yes 71107628
chr3 189793809 189793813 ESR1 TRANSFAC yes 8618269
chr3 189793809 189793813 ESR1 TRANSFAC yes 71107629
chr3 189793830 189793834 LFA1 TRANSFAC yes 8618270
chr3 189793830 189793834 LFA1 TRANSFAC yes 71107630
chr3 189793835 189793840 H4TF1 TRANSFAC yes 8618271
chr3 189793835 189793840 H4TF1 TRANSFAC yes 71107631
chr3 189793840 189793844 YY1 TRANSFAC yes 8618272
chr3 189793840 189793844 YY1 TRANSFAC yes 71107632
chr3 189793846 189793858 FOXI1 JASPAR yes 8618273
chr3 189793846 189793858 FOXI1 JASPAR yes 71107633
chr3 189793849 189793853 YY1 TRANSFAC yes 8618274
chr3 189793849 189793853 YY1 TRANSFAC yes 71107634
chr3 189793857 189793869 SRF JASPAR yes 8618275
chr3 189793857 189793869 SRF JASPAR yes 71107635
chr3 189793869 189793884 TP53 JASPAR yes 8618276
chr3 189793869 189793884 TP53 JASPAR yes 71107636
chr3 189793884 189793895 EBF1 JASPAR yes 8618277
chr3 189793884 189793895 EBF1 JASPAR yes 71107637
chr3 189793902 189793913 ESRRA JASPAR yes 8618278
chr3 189793902 189793913 ESRRA JASPAR yes 71107638
chr3 189793916 189793926 REL JASPAR yes 8618279
chr3 189793916 189793926 REL JASPAR yes 71107639
chr3 189793916 189793927 NFKB1 JASPAR yes 8618280
chr3 189793916 189793927 NFKB1 JASPAR yes 71107640
chr3 189793919 189793924 H4TF1 TRANSFAC yes 8618281
chr3 189793919 189793924 H4TF1 TRANSFAC yes 71107641
chr3 189793920 189793934 E2F7 JASPAR yes 8618282
chr3 189793920 189793934 E2F7 JASPAR yes 71107642
chr3 189793925 189793943 SRF JASPAR yes 8618283
chr3 189793925 189793943 SRF JASPAR yes 71107643
chr3 189793937 189793952 FOXP1 JASPAR yes 8618284
chr3 189793937 189793952 FOXP1 JASPAR yes 71107644
chr3 189793938 189793951 POU2F2 JASPAR yes 8618285
chr3 189793938 189793951 POU2F2 JASPAR yes 71107645
chr3 189793939 189793960 IRF1 JASPAR yes 8618286
chr3 189793939 189793960 IRF1 JASPAR yes 71107646
chr3 189793943 189793958 STAT2 JASPAR yes 8618287
chr3 189793943 189793958 STAT2 JASPAR yes 71107647
chr3 189793947 189793967 RREB1 JASPAR yes 8618288
chr3 189793947 189793967 RREB1 JASPAR yes 71107648
SNP sites on vista43630[chr3:189793562-189793947]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 189793770 rs149687099 G C no 7287707
chr3 189793778 rs112334771 C T
SOX10
7287708
chr3 189793787 rs11714786 G A no 7287709
chr3 189793788 rs75835871 T C no 7287710
chr3 189793847 rs111927465 G A
FOXI1
7287711
chr3 189793848 rs115851230 T A,C
FOXI1
7287712
chr3 189793932 rs567880354 T C
E2F7 SRF
7287713
chr3 189793934 rs536973945 T C
E2F7 SRF
7287714
chr3 189793942 rs550441952 T C
FOXP1 IRF1 POU2F2 SRF
7287715
Genes possibly regulated by vista43630[chr3:189793562-189793947]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 189674517 189840226 - LEPREL1 ENSG00000090530.5 189840226 0.81 0.96 4374 53721
Expression level of Genes
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miRNAs possibly regulated by vista43630[chr3:189793562-189793947]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results