EnhancerDB
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  3. rs550441952[chr3:189793942]
Enhancers that have rs550441952[chr3:189793942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 189786505 189806245 enh36260
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr3 189793562 189793947 vista43630
VISTA
Transcript factors that have rs550441952[chr3:189793942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 189793925 189793943 SRF JASPAR yes 8618283
chr3 189793925 189793943 SRF JASPAR yes 71107643
chr3 189793937 189793952 FOXP1 JASPAR yes 8618284
chr3 189793937 189793952 FOXP1 JASPAR yes 71107644
chr3 189793938 189793951 POU2F2 JASPAR yes 8618285
chr3 189793938 189793951 POU2F2 JASPAR yes 71107645
chr3 189793939 189793960 IRF1 JASPAR yes 8618286
chr3 189793939 189793960 IRF1 JASPAR yes 71107646
Genes associated with rs550441952[chr3:189793942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More