EnhancerDB
  1. Home
  2. Enhancers
  3. vista43878[chr4:1042563-1042904]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43878[chr4:1042563-1042904]
Back to top
Tissue distribution of vista43878
Back to top
Transcription factor that possibly regulate vista43878[chr4:1042563-1042904]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 1042563 1042573 MEF2A JASPAR yes 49188571
chr4 1042563 1042573 MEF2A JASPAR yes 87793627
chr4 1042564 1042568 TEAD2 TRANSFAC yes 49188572
chr4 1042564 1042568 TEAD2 TRANSFAC yes 87793628
chr4 1042564 1042569 TBP TRANSFAC yes 49188573
chr4 1042564 1042569 TBP TRANSFAC yes 87793629
chr4 1042608 1042618 GSX2 JASPAR yes 49188574
chr4 1042608 1042618 HESX1 JASPAR yes 49188575
chr4 1042608 1042618 LBX2 JASPAR yes 49188576
chr4 1042608 1042618 MIXL1 JASPAR yes 49188577
chr4 1042608 1042618 MNX1 JASPAR yes 49188578
chr4 1042608 1042618 RAX JASPAR yes 49188579
chr4 1042608 1042618 GSX2 JASPAR yes 87793630
chr4 1042608 1042618 HESX1 JASPAR yes 87793631
chr4 1042608 1042618 LBX2 JASPAR yes 87793632
chr4 1042608 1042618 MIXL1 JASPAR yes 87793633
chr4 1042608 1042618 MNX1 JASPAR yes 87793634
chr4 1042608 1042618 RAX JASPAR yes 87793635
chr4 1042609 1042617 ISX JASPAR yes 49188580
chr4 1042609 1042617 LHX9 JASPAR yes 49188581
chr4 1042609 1042617 LMX1B JASPAR yes 49188582
chr4 1042609 1042617 PRRX1 JASPAR yes 49188583
chr4 1042609 1042617 RAX2 JASPAR yes 49188584
chr4 1042609 1042617 SHOX JASPAR yes 49188585
chr4 1042609 1042617 UNCX JASPAR yes 49188586
chr4 1042609 1042617 ISX JASPAR yes 87793636
chr4 1042609 1042617 LHX9 JASPAR yes 87793637
chr4 1042609 1042617 LMX1B JASPAR yes 87793638
chr4 1042609 1042617 PRRX1 JASPAR yes 87793639
chr4 1042609 1042617 RAX2 JASPAR yes 87793640
chr4 1042609 1042617 SHOX JASPAR yes 87793641
chr4 1042609 1042617 UNCX JASPAR yes 87793642
chr4 1042610 1042621 BATF JASPAR yes 49188587
chr4 1042610 1042621 BATF JASPAR yes 87793643
chr4 1042612 1042623 FOSL1 JASPAR yes 49188588
chr4 1042612 1042623 FOSL1 JASPAR yes 87793644
chr4 1042621 1042626 MYC TRANSFAC yes 49188589
chr4 1042621 1042626 MYC TRANSFAC yes 87793645
chr4 1042652 1042663 FOS JASPAR yes 49188590
chr4 1042652 1042663 FOS JASPAR yes 87793646
chr4 1042662 1042683 ZNF263 JASPAR yes 49188591
chr4 1042662 1042683 ZNF263 JASPAR yes 87793647
chr4 1042681 1042696 RFX5 JASPAR yes 49188592
chr4 1042681 1042696 RFX5 JASPAR yes 87793648
chr4 1042684 1042688 H4TF2 TRANSFAC yes 49188593
chr4 1042684 1042688 H4TF2 TRANSFAC yes 87793649
chr4 1042690 1042696 SP1 TRANSFAC yes 49188594
chr4 1042690 1042696 SP1 TRANSFAC yes 87793650
chr4 1042691 1042696 SP1 TRANSFAC yes 49188595
chr4 1042691 1042696 SP1 TRANSFAC yes 87793651
chr4 1042695 1042700 SP1 TRANSFAC yes 49188596
chr4 1042695 1042700 SP1 TRANSFAC yes 87793652
chr4 1042714 1042728 SPIC JASPAR yes 49188597
chr4 1042714 1042728 SPIC JASPAR yes 87793653
chr4 1042718 1042728 ETV6 JASPAR yes 49188598
chr4 1042718 1042728 ETV6 JASPAR yes 87793654
chr4 1042718 1042731 NFKB1 JASPAR yes 49188599
chr4 1042718 1042731 NFKB2 JASPAR yes 49188600
chr4 1042718 1042731 NFKB1 JASPAR yes 87793655
chr4 1042718 1042731 NFKB2 JASPAR yes 87793656
chr4 1042720 1042725 ETS2 TRANSFAC yes 49188601
chr4 1042720 1042725 ETS2 TRANSFAC yes 87793657
chr4 1042748 1042763 ZBTB33 JASPAR yes 49188602
chr4 1042748 1042763 ZBTB33 JASPAR yes 87793658
chr4 1042752 1042763 EBF1 JASPAR yes 49188603
chr4 1042752 1042763 EBF1 JASPAR yes 87793659
chr4 1042779 1042794 ZIC4 JASPAR yes 49188604
chr4 1042779 1042794 ZIC4 JASPAR yes 87793660
chr4 1042780 1042794 ZIC1 JASPAR yes 49188605
chr4 1042780 1042794 ZIC1 JASPAR yes 87793661
chr4 1042783 1042795 INSM1 JASPAR yes 49188606
chr4 1042783 1042795 INSM1 JASPAR yes 87793662
chr4 1042788 1042801 NFKB1 JASPAR yes 49188607
chr4 1042788 1042801 NFKB1 JASPAR yes 87793663
chr4 1042816 1042826 FIGLA JASPAR yes 49188608
chr4 1042816 1042826 TCF3 JASPAR yes 49188609
chr4 1042816 1042826 FIGLA JASPAR yes 87793664
chr4 1042816 1042826 TCF3 JASPAR yes 87793665
chr4 1042817 1042826 SNAI2 JASPAR yes 49188610
chr4 1042817 1042826 SNAI2 JASPAR yes 87793666
chr4 1042818 1042823 USF2 TRANSFAC yes 49188611
chr4 1042818 1042823 USF2 TRANSFAC yes 87793667
chr4 1042822 1042833 E2F4 JASPAR yes 49188612
chr4 1042822 1042833 E2F6 JASPAR yes 49188613
chr4 1042822 1042833 E2F4 JASPAR yes 87793668
chr4 1042822 1042833 E2F6 JASPAR yes 87793669
chr4 1042823 1042834 E2F1 JASPAR yes 49188614
chr4 1042823 1042834 E2F1 JASPAR yes 87793670
chr4 1042827 1042832 SP1 TRANSFAC yes 49188615
chr4 1042827 1042832 SP1 TRANSFAC yes 87793671
chr4 1042840 1042861 REST JASPAR yes 49188616
chr4 1042840 1042861 REST JASPAR yes 87793672
chr4 1042855 1042872 RARA JASPAR yes 49188617
chr4 1042855 1042872 RARA JASPAR yes 87793673
chr4 1042865 1042875 TBX21 JASPAR yes 49188618
chr4 1042865 1042875 TBX21 JASPAR yes 87793674
chr4 1042880 1042885 TFAP2A TRANSFAC yes 49188619
chr4 1042880 1042885 TFAP2A TRANSFAC yes 87793675
chr4 1042880 1042886 MZF1 JASPAR yes 49188620
chr4 1042880 1042886 MZF1 JASPAR yes 87793676
chr4 1042897 1042905 MEIS3 JASPAR yes 49188621
chr4 1042897 1042905 MEIS3 JASPAR yes 87793677
chr4 1042898 1042902 NFE TRANSFAC yes 49188622
chr4 1042898 1042902 NFE TRANSFAC yes 87793678
SNP sites on vista43878[chr4:1042563-1042904]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 1042608 rs56958378 G A,T
GSX2 HESX1 LBX2 MIXL1 MNX1 RAX
7344121
chr4 1042679 rs577285106 G A,C
ZNF263
7344122
chr4 1042734 rs149843176 C T no 7344123
chr4 1042767 rs184818682 C T no 7344124
chr4 1042797 rs146389379 C T
NFKB1
7344125
chr4 1042829 rs376554188 C T
E2F1 E2F4 E2F6 SP1
7344126
chr4 1042890 rs73793904 A C no 7344127
Genes possibly regulated by vista43878[chr4:1042563-1042904]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 952675 980683 - DGKQ ENSG00000145214.9 980683 0.68 1.0 4447 38120
chr4 972861 987228 - SLC26A1 ENSG00000145217.9 987228 0.91 1.0 4448 44665
chr4 980785 998316 + IDUA ENSG00000127415.8 980785 0.63 1.0 4449 38222
chr4 1003724 1020685 + FGFRL1 ENSG00000127418.10 1003724 0.87 1.0 4450 61161
chr4 1050038 1107350 - RNF212 ENSG00000178222.8 1107350 0.86 0.97 4451 35554
Expression level of Genes
Back to top
miRNAs possibly regulated by vista43878[chr4:1042563-1042904]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results