EnhancerDB
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  3. rs56958378[chr4:1042608]
Enhancers that have rs56958378[chr4:1042608]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 1021365 1049299 enh36295
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
chr4 1042563 1042904 vista43878
VISTA
Transcript factors that have rs56958378[chr4:1042608]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 1042608 1042618 GSX2 JASPAR yes 49188574
chr4 1042608 1042618 HESX1 JASPAR yes 49188575
chr4 1042608 1042618 LBX2 JASPAR yes 49188576
chr4 1042608 1042618 MIXL1 JASPAR yes 49188577
chr4 1042608 1042618 MNX1 JASPAR yes 49188578
chr4 1042608 1042618 RAX JASPAR yes 49188579
chr4 1042608 1042618 GSX2 JASPAR yes 87793630
chr4 1042608 1042618 HESX1 JASPAR yes 87793631
chr4 1042608 1042618 LBX2 JASPAR yes 87793632
chr4 1042608 1042618 MIXL1 JASPAR yes 87793633
chr4 1042608 1042618 MNX1 JASPAR yes 87793634
chr4 1042608 1042618 RAX JASPAR yes 87793635
Genes associated with rs56958378[chr4:1042608], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More