EnhancerDB
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  3. vista43926[chr4:2537711-2538436]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43926[chr4:2537711-2538436]
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Tissue distribution of vista43926
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Transcription factor that possibly regulate vista43926[chr4:2537711-2538436]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 2536980 2539612 POLR2A UCSC Txn Factor no Conserved 108531863
chr4 2536980 2539612 POLR2A UCSC Txn Factor no Conserved 108531864
chr4 2537246 2538109 PHF8 UCSC Txn Factor no Conserved 108531865
chr4 2537884 2538172 RUNX3 UCSC Txn Factor no Conserved 108531866
chr4 2537947 2538412 MAZ UCSC Txn Factor no Conserved 108531867
chr4 2537954 2538304 ZNF143 UCSC Txn Factor no Conserved 108531868
chr4 2538011 2538337 SIX5 UCSC Txn Factor no Conserved 108531869
chr4 2537711 2537716 SP1 TRANSFAC yes 49190734
chr4 2537714 2537724 SP1 JASPAR yes 49190735
chr4 2537717 2537730 TFAP2A JASPAR yes 49190736
chr4 2537717 2537730 TFAP2B JASPAR yes 49190737
chr4 2537717 2537730 TFAP2C JASPAR yes 49190738
chr4 2537735 2537747 ZBTB7A JASPAR yes 49190739
chr4 2537740 2537744 H4TF2 TRANSFAC yes 49190740
chr4 2537746 2537757 JUNB JASPAR yes 49190741
chr4 2537747 2537758 FOS JASPAR yes 49190742
chr4 2537747 2537758 FOSL1 JASPAR yes 49190743
chr4 2537747 2537758 JUND JASPAR yes 49190744
chr4 2537747 2537758 NFE2 JASPAR yes 49190745
chr4 2537748 2537757 JDP2 JASPAR yes 49190746
chr4 2537748 2537759 FOSL2 JASPAR yes 49190747
chr4 2537748 2537759 JUNB JASPAR yes 49190748
chr4 2537748 2537762 JUN JASPAR yes 49190749
chr4 2537749 2537760 BATF JASPAR yes 49190750
chr4 2537778 2537789 ESRRA JASPAR yes 49190751
chr4 2537778 2537789 ESRRB JASPAR yes 49190752
chr4 2537778 2537791 NR2F1 JASPAR yes 49190753
chr4 2537780 2537788 NR4A2 JASPAR yes 49190754
chr4 2537782 2537786 ESR1 TRANSFAC yes 49190755
chr4 2537822 2537827 SP1 TRANSFAC yes 49190756
chr4 2537822 2537828 SP1 TRANSFAC yes 49190757
chr4 2537829 2537845 ZNF143 JASPAR yes 49190758
chr4 2537859 2537869 ID4 JASPAR yes 49190759
chr4 2537859 2537869 TCF4 JASPAR yes 49190760
chr4 2537861 2537866 USF2 TRANSFAC yes 49190761
chr4 2537866 2537871 SP1 TRANSFAC yes 49190762
chr4 2537881 2537889 SP1 TRANSFAC yes 49190763
chr4 2537890 2537895 SP1 TRANSFAC yes 49190764
chr4 2537891 2537896 SP1 TRANSFAC yes 49190765
chr4 2537894 2537899 SP1 TRANSFAC yes 49190766
chr4 2537895 2537900 SP1 TRANSFAC yes 49190767
chr4 2537895 2537901 SP1 TRANSFAC yes 49190768
chr4 2537898 2537906 SP1 TRANSFAC yes 49190769
chr4 2537899 2537904 SP1 TRANSFAC yes 49190770
chr4 2537900 2537905 SP1 TRANSFAC yes 49190771
chr4 2537903 2537908 SP1 TRANSFAC yes 49190772
chr4 2537904 2537909 SP1 TRANSFAC yes 49190773
chr4 2537904 2537913 THAP1 JASPAR yes 49190774
chr4 2537907 2537911 LFA1 TRANSFAC yes 49190775
chr4 2537914 2537926 PKNOX1 JASPAR yes 49190776
chr4 2537914 2537926 TGIF1 JASPAR yes 49190777
chr4 2537921 2537925 ESR1 TRANSFAC yes 49190778
chr4 2537929 2537934 SP1 TRANSFAC yes 49190779
chr4 2537940 2537951 E2F1 JASPAR yes 49190780
chr4 2537961 2537974 TFAP2A JASPAR yes 49190781
chr4 2537961 2537974 TFAP2B JASPAR yes 49190782
chr4 2537961 2537974 TFAP2C JASPAR yes 49190783
chr4 2537969 2537974 SP1 TRANSFAC yes 49190784
chr4 2537971 2537982 NRF1 JASPAR yes 49190785
chr4 2537978 2537997 CTCF JASPAR yes 49190786
chr4 2538003 2538008 SP1 TRANSFAC yes 49190787
chr4 2538006 2538018 ZBTB7A JASPAR yes 49190788
chr4 2538007 2538019 GLI2 JASPAR yes 49190789
chr4 2538007 2538022 RUNX2 JASPAR yes 49190790
chr4 2538016 2538021 SP1 TRANSFAC yes 49190791
chr4 2538034 2538045 NRF1 JASPAR yes 49190792
chr4 2538035 2538043 SP1 TRANSFAC yes 49190793
chr4 2538039 2538044 SP1 TRANSFAC yes 49190794
chr4 2538040 2538045 SP1 TRANSFAC yes 49190795
chr4 2538063 2538068 SP1 TRANSFAC yes 49190796
chr4 2538064 2538079 JUND JASPAR yes 49190797
chr4 2538066 2538080 ATF7 JASPAR yes 49190798
chr4 2538066 2538080 BATF3 JASPAR yes 49190799
chr4 2538067 2538079 JDP2 JASPAR yes 49190800
chr4 2538067 2538082 JUND JASPAR yes 49190801
chr4 2538068 2538081 JUN JASPAR yes 49190802
chr4 2538069 2538076 JUN TRANSFAC yes 49190803
chr4 2538090 2538105 RFX5 JASPAR yes 49190804
chr4 2538090 2538111 ZNF263 JASPAR yes 49190805
chr4 2538154 2538158 H4TF2 TRANSFAC yes 49190806
chr4 2538168 2538182 ZIC1 JASPAR yes 49190807
chr4 2538171 2538183 NHLH1 JASPAR yes 49190808
chr4 2538172 2538182 NHLH1 JASPAR yes 49190809
chr4 2538186 2538190 LFA1 TRANSFAC yes 49190810
chr4 2538218 2538236 TP73 JASPAR yes 49190811
chr4 2538230 2538242 MYBL1 JASPAR yes 49190812
chr4 2538235 2538238 MYB TRANSFAC yes 49190813
chr4 2538235 2538250 ZIC3 JASPAR yes 49190814
chr4 2538244 2538254 ZNF740 JASPAR yes 49190815
chr4 2538246 2538267 ZNF263 JASPAR yes 49190816
chr4 2538249 2538254 SP1 TRANSFAC yes 49190817
chr4 2538252 2538256 LFA1 TRANSFAC yes 49190818
chr4 2538274 2538286 TFAP2A JASPAR yes 49190819
chr4 2538275 2538284 TFAP2A JASPAR yes 49190820
chr4 2538279 2538286 SP1 TRANSFAC yes 49190821
chr4 2538279 2538289 SP1 JASPAR yes 49190822
chr4 2538281 2538286 SP1 TRANSFAC yes 49190823
chr4 2538289 2538310 ZNF263 JASPAR yes 49190824
chr4 2538290 2538300 SP1 JASPAR yes 49190825
chr4 2538291 2538296 SP1 TRANSFAC yes 49190826
chr4 2538291 2538311 RREB1 JASPAR yes 49190827
chr4 2538292 2538297 SP1 TRANSFAC yes 49190828
chr4 2538292 2538298 SP1 TRANSFAC yes 49190829
chr4 2538292 2538312 RREB1 JASPAR yes 49190830
chr4 2538293 2538313 RREB1 JASPAR yes 49190831
chr4 2538294 2538315 ZNF263 JASPAR yes 49190832
chr4 2538295 2538315 RREB1 JASPAR yes 49190833
chr4 2538296 2538316 RREB1 JASPAR yes 49190834
chr4 2538297 2538302 SP1 TRANSFAC yes 49190835
chr4 2538297 2538317 RREB1 JASPAR yes 49190836
chr4 2538297 2538318 ZNF263 JASPAR yes 49190837
chr4 2538298 2538308 ZNF740 JASPAR yes 49190838
chr4 2538298 2538312 PLAG1 JASPAR yes 49190839
chr4 2538298 2538318 RREB1 JASPAR yes 49190840
chr4 2538299 2538319 RREB1 JASPAR yes 49190841
chr4 2538300 2538310 SP1 JASPAR yes 49190842
chr4 2538300 2538315 NR2C2 JASPAR yes 49190843
chr4 2538303 2538308 SP1 TRANSFAC yes 49190844
chr4 2538304 2538314 ZNF740 JASPAR yes 49190845
chr4 2538306 2538316 SP1 JASPAR yes 49190846
chr4 2538307 2538317 SP1 JASPAR yes 49190847
chr4 2538310 2538315 SP1 TRANSFAC yes 49190848
chr4 2538314 2538319 SP1 TRANSFAC yes 49190849
chr4 2538319 2538339 RREB1 JASPAR yes 49190850
chr4 2538319 2538340 ZNF263 JASPAR yes 49190851
chr4 2538322 2538336 PLAG1 JASPAR yes 49190852
chr4 2538324 2538330 SP1 TRANSFAC yes 49190853
chr4 2538324 2538334 SP1 JASPAR yes 49190854
chr4 2538326 2538347 ZNF263 JASPAR yes 49190855
chr4 2538327 2538337 MZF1 JASPAR yes 49190856
chr4 2538328 2538347 REST JASPAR yes 49190857
chr4 2538329 2538339 SP1 JASPAR yes 49190858
chr4 2538329 2538350 ZNF263 JASPAR yes 49190859
chr4 2538330 2538336 SP1 TRANSFAC yes 49190860
chr4 2538330 2538340 SP1 JASPAR yes 49190861
chr4 2538331 2538345 ZIC1 JASPAR yes 49190862
chr4 2538331 2538346 ZIC3 JASPAR yes 49190863
chr4 2538331 2538346 ZIC4 JASPAR yes 49190864
chr4 2538332 2538353 ZNF263 JASPAR yes 49190865
chr4 2538333 2538354 ZNF263 JASPAR yes 49190866
chr4 2538343 2538353 SP1 JASPAR yes 49190867
chr4 2538347 2538357 MZF1 JASPAR yes 49190868
chr4 2538349 2538359 SP1 JASPAR yes 49190869
chr4 2538350 2538356 SP1 TRANSFAC yes 49190870
chr4 2538350 2538360 SP1 JASPAR yes 49190871
chr4 2538374 2538389 PRDM1 JASPAR yes 49190872
chr4 2538375 2538385 SP1 JASPAR yes 49190873
chr4 2538375 2538394 CTCF JASPAR yes 49190874
chr4 2538389 2538400 YY2 JASPAR yes 49190875
chr4 2538390 2538402 YY1 JASPAR yes 49190876
chr4 2538400 2538414 NR2F1 JASPAR yes 49190877
chr4 2538407 2538410 MYB TRANSFAC yes 49190878
chr4 2538414 2538418 ESR1 TRANSFAC yes 49190879
SNP sites on vista43926[chr4:2537711-2538436]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 2537836 rs536750807 A G
PHF8 POLR2A ZNF143
7352807
chr4 2537897 rs536275783 G A
PHF8 POLR2A RUNX3 SP1
7352808
chr4 2537955 rs552970463 T C
MAZ PHF8 POLR2A RUNX3 ZNF143
7352809
chr4 2538050 rs575475333 T G
MAZ PHF8 POLR2A RUNX3 SIX5 ZNF143
7352810
Genes possibly regulated by vista43926[chr4:2537711-2538436]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 2451700 2464668 + RP11-503N18.3 ENSG00000249428.1 2451700 0.92 1.0 4472 13989
chr4 2463947 2627047 + RNF4 ENSG00000063978.11 2463947 0.69 0.99 4473 26236
chr4 2626988 2734292 + FAM193A ENSG00000125386.10 2626988 0.68 0.99 4474 11448
Expression level of Genes
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miRNAs possibly regulated by vista43926[chr4:2537711-2538436]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results