EnhancerDB
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  3. vista4526[chr1:200839315-200839533]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4526[chr1:200839315-200839533]
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Tissue distribution of vista4526
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Transcription factor that possibly regulate vista4526[chr1:200839315-200839533]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 200838629 200839561 POLR2A UCSC Txn Factor no Conserved 107855502
chr1 200839024 200839372 NFIC UCSC Txn Factor no Conserved 107855509
chr1 200839069 200839545 RUNX3 UCSC Txn Factor no Conserved 107855515
chr1 200839126 200839359 BATF UCSC Txn Factor no Conserved 107855523
chr1 200839321 200839325 NFE TRANSFAC yes 118430526
chr1 200839330 200839345 HNF4A JASPAR yes 118430527
chr1 200839331 200839346 HNF4G JASPAR yes 118430528
chr1 200839354 200839370 SOX4 JASPAR yes 118430529
chr1 200839358 200839364 NFE2 TRANSFAC yes 118430530
chr1 200839405 200839417 ELF1 JASPAR yes 118430531
chr1 200839405 200839417 ELF4 JASPAR yes 118430532
chr1 200839406 200839417 SPDEF JASPAR yes 118430533
chr1 200839407 200839416 ELK4 JASPAR yes 118430534
chr1 200839407 200839417 ETV3 JASPAR yes 118430535
chr1 200839407 200839417 ETV5 JASPAR yes 118430536
chr1 200839411 200839422 GCM1 JASPAR yes 118430537
chr1 200839413 200839422 HIC2 JASPAR yes 118430538
chr1 200839416 200839420 LFA1 TRANSFAC yes 118430539
chr1 200839424 200839439 RFX5 JASPAR yes 118430540
chr1 200839433 200839443 MAX JASPAR yes 118430541
chr1 200839437 200839452 TP53 JASPAR yes 118430542
chr1 200839448 200839452 YY1 TRANSFAC yes 118430543
chr1 200839465 200839475 SP1 JASPAR yes 118430544
chr1 200839468 200839473 SP1 TRANSFAC yes 118430545
chr1 200839491 200839503 TFAP2A JASPAR yes 118430546
chr1 200839491 200839503 TFAP2B JASPAR yes 118430547
chr1 200839491 200839503 TFAP2C JASPAR yes 118430548
chr1 200839491 200839506 TFAP2A JASPAR yes 118430549
chr1 200839492 200839501 TFAP2A JASPAR yes 118430550
chr1 200839517 200839522 ETS2 TRANSFAC yes 118430551
chr1 200839522 200839526 H4TF2 TRANSFAC yes 118430552
SNP sites on vista4526[chr1:200839315-200839533]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 200839424 rs546330894 G A
POLR2A RFX5 RUNX3
850210
Genes possibly regulated by vista4526[chr1:200839315-200839533]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 200842083 200843306 + GPR25 ENSG00000170128.2 200842083 0.93 0.0 1696 97450
chr1 200860176 200884863 + C1orf106 ENSG00000163362.6 200860176 0.94 1.0 1697 79357
Expression level of Genes
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miRNAs possibly regulated by vista4526[chr1:200839315-200839533]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results