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- rs546330894[chr1:200839424]
Enhancers that have rs546330894[chr1:200839424]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
200839315 |
200839533 |
vista4526 |
|
|
Transcript factors that have rs546330894[chr1:200839424]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
200838629
|
200839561
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107855502
|
|
|
chr1
|
200838915
|
200839505
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107855506
|
|
|
chr1
|
200838935
|
200839565
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107855507
|
|
|
chr1
|
200838987
|
200839503
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107855508
|
|
|
chr1
|
200839035
|
200839595
|
TEF1
|
GTRD
|
no
|
Bone (Osteoblast)
|
107855512
|
|
|
chr1
|
200839069
|
200839545
|
RUNX3
|
UCSC Txn Factor
|
no
|
Conserved
|
107855515
|
|
|
chr1
|
200839069
|
200839545
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107855516
|
|
|
chr1
|
200839128
|
200839458
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107855525
|
|
|
chr1
|
200839144
|
200839524
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107855526
|
|
|
chr1
|
200839424
|
200839439
|
RFX5
|
JASPAR
|
yes
|
|
118430540
|
|
Genes associated with rs546330894[chr1:200839424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |