EnhancerDB
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  3. vista4534[chr1:200990087-200990628]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4534[chr1:200990087-200990628]
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Tissue distribution of vista4534
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Transcription factor that possibly regulate vista4534[chr1:200990087-200990628]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 200990072 200990506 CTCF UCSC Txn Factor no Conserved 107855857
chr1 200990128 200990368 EGR1 UCSC Txn Factor no Conserved 107855862
chr1 200990084 200990099 STAT1 JASPAR yes 34478632
chr1 200990084 200990099 STAT1 JASPAR yes 118431065
chr1 200990086 200990097 STAT3 JASPAR yes 34478633
chr1 200990086 200990097 STAT3 JASPAR yes 118431066
chr1 200990104 200990114 TFAP4 JASPAR yes 34478634
chr1 200990104 200990114 TFAP4 JASPAR yes 118431067
chr1 200990131 200990143 TFAP2A JASPAR yes 34478635
chr1 200990131 200990143 TFAP2B JASPAR yes 34478636
chr1 200990131 200990143 TFAP2C JASPAR yes 34478637
chr1 200990131 200990143 TFAP2A JASPAR yes 118431068
chr1 200990131 200990143 TFAP2B JASPAR yes 118431069
chr1 200990131 200990143 TFAP2C JASPAR yes 118431070
chr1 200990131 200990146 TFAP2A JASPAR yes 34478638
chr1 200990131 200990146 TFAP2C JASPAR yes 34478639
chr1 200990131 200990146 TFAP2A JASPAR yes 118431071
chr1 200990131 200990146 TFAP2C JASPAR yes 118431072
chr1 200990132 200990141 TFAP2A JASPAR yes 34478640
chr1 200990132 200990141 TFAP2A JASPAR yes 118431073
chr1 200990133 200990142 TFAP2A JASPAR yes 34478641
chr1 200990133 200990142 TFAP2A JASPAR yes 118431074
chr1 200990167 200990182 STAT1 JASPAR yes 34478642
chr1 200990167 200990182 STAT1 JASPAR yes 118431075
chr1 200990167 200990184 ZNF410 JASPAR yes 34478643
chr1 200990167 200990184 ZNF410 JASPAR yes 118431076
chr1 200990168 200990186 SRF JASPAR yes 34478644
chr1 200990168 200990186 SRF JASPAR yes 118431077
chr1 200990169 200990180 STAT1 JASPAR yes 34478645
chr1 200990169 200990180 STAT3 JASPAR yes 34478646
chr1 200990169 200990180 STAT1 JASPAR yes 118431078
chr1 200990169 200990180 STAT3 JASPAR yes 118431079
chr1 200990170 200990186 SRF JASPAR yes 34478647
chr1 200990170 200990186 SRF JASPAR yes 118431080
chr1 200990170 200990188 SRF JASPAR yes 34478648
chr1 200990170 200990188 SRF JASPAR yes 118431081
chr1 200990171 200990183 SRF JASPAR yes 34478649
chr1 200990171 200990183 SRF JASPAR yes 118431082
chr1 200990174 200990184 BARHL2 JASPAR yes 34478650
chr1 200990174 200990184 BARHL2 JASPAR yes 118431083
chr1 200990215 200990224 ZEB1 JASPAR yes 34478651
chr1 200990215 200990224 ZEB1 JASPAR yes 118431084
chr1 200990229 200990234 H4TF1 TRANSFAC yes 34478652
chr1 200990229 200990234 H4TF1 TRANSFAC yes 118431085
chr1 200990231 200990243 INSM1 JASPAR yes 34478653
chr1 200990231 200990243 INSM1 JASPAR yes 118431086
chr1 200990231 200990251 RREB1 JASPAR yes 34478654
chr1 200990231 200990251 RREB1 JASPAR yes 118431087
chr1 200990238 200990252 PLAG1 JASPAR yes 34478655
chr1 200990238 200990252 PLAG1 JASPAR yes 118431088
chr1 200990247 200990268 ZNF263 JASPAR yes 34478656
chr1 200990247 200990268 ZNF263 JASPAR yes 118431089
chr1 200990250 200990260 SP1 JASPAR yes 34478657
chr1 200990250 200990260 SP1 JASPAR yes 118431090
chr1 200990250 200990271 ZNF263 JASPAR yes 34478658
chr1 200990250 200990271 ZNF263 JASPAR yes 118431091
chr1 200990279 200990284 ETS2 TRANSFAC yes 34478659
chr1 200990279 200990284 ETS2 TRANSFAC yes 118431092
chr1 200990281 200990292 NFKB1 JASPAR yes 34478660
chr1 200990281 200990292 NFKB1 JASPAR yes 118431093
chr1 200990287 200990297 MZF1 JASPAR yes 34478661
chr1 200990287 200990297 MZF1 JASPAR yes 118431094
chr1 200990289 200990303 PLAG1 JASPAR yes 34478662
chr1 200990289 200990303 PLAG1 JASPAR yes 118431095
chr1 200990309 200990321 TAL1 JASPAR yes 34478663
chr1 200990309 200990321 TAL1 JASPAR yes 118431096
chr1 200990311 200990321 OLIG3 JASPAR yes 34478664
chr1 200990311 200990321 OLIG3 JASPAR yes 118431097
chr1 200990337 200990345 SP1 TRANSFAC yes 34478665
chr1 200990337 200990345 SP1 TRANSFAC yes 118431098
chr1 200990382 200990386 NFE TRANSFAC yes 34478666
chr1 200990382 200990386 NFE TRANSFAC yes 118431099
chr1 200990403 200990422 PAX5 JASPAR yes 34478667
chr1 200990403 200990422 PAX5 JASPAR yes 118431100
chr1 200990429 200990441 HES5 JASPAR yes 34478668
chr1 200990429 200990441 HES7 JASPAR yes 34478669
chr1 200990429 200990441 HES5 JASPAR yes 118431101
chr1 200990429 200990441 HES7 JASPAR yes 118431102
chr1 200990458 200990473 NR2C2 JASPAR yes 34478670
chr1 200990458 200990473 NR2C2 JASPAR yes 118431103
chr1 200990458 200990479 ZNF263 JASPAR yes 34478671
chr1 200990458 200990479 ZNF263 JASPAR yes 118431104
chr1 200990460 200990471 E2F6 JASPAR yes 34478672
chr1 200990460 200990471 E2F6 JASPAR yes 118431105
chr1 200990461 200990466 SP1 TRANSFAC yes 34478673
chr1 200990461 200990466 SP1 TRANSFAC yes 118431106
chr1 200990462 200990472 SP1 JASPAR yes 34478674
chr1 200990462 200990472 ZNF740 JASPAR yes 34478675
chr1 200990462 200990472 SP1 JASPAR yes 118431107
chr1 200990462 200990472 ZNF740 JASPAR yes 118431108
chr1 200990464 200990470 MAZ TRANSFAC yes 34478676
chr1 200990464 200990470 MAZ TRANSFAC yes 118431109
chr1 200990467 200990488 ZNF263 JASPAR yes 34478677
chr1 200990467 200990488 ZNF263 JASPAR yes 118431110
chr1 200990476 200990486 SP1 JASPAR yes 34478678
chr1 200990476 200990486 SP1 JASPAR yes 118431111
chr1 200990477 200990486 SP1 TRANSFAC yes 34478679
chr1 200990477 200990486 SP1 TRANSFAC yes 118431112
chr1 200990478 200990483 SP1 TRANSFAC yes 34478680
chr1 200990478 200990483 SP1 TRANSFAC yes 118431113
chr1 200990479 200990484 SP1 TRANSFAC yes 34478681
chr1 200990479 200990484 SP1 TRANSFAC yes 118431114
chr1 200990479 200990485 SP1 TRANSFAC yes 34478682
chr1 200990479 200990485 SP1 TRANSFAC yes 118431115
chr1 200990482 200990487 SP1 TRANSFAC yes 34478683
chr1 200990482 200990487 SP1 TRANSFAC yes 118431116
chr1 200990493 200990504 STAT1 JASPAR yes 34478684
chr1 200990493 200990504 STAT1 JASPAR yes 118431117
chr1 200990534 200990543 SP1 TRANSFAC yes 34478685
chr1 200990534 200990543 SP1 TRANSFAC yes 118431118
chr1 200990535 200990545 SP1 JASPAR yes 34478686
chr1 200990535 200990545 SP1 JASPAR yes 118431119
chr1 200990537 200990547 ZNF740 JASPAR yes 34478687
chr1 200990537 200990547 ZNF740 JASPAR yes 118431120
chr1 200990543 200990547 H1TF2 TRANSFAC yes 34478688
chr1 200990543 200990547 NFE TRANSFAC yes 34478689
chr1 200990543 200990547 SRF TRANSFAC yes 34478690
chr1 200990543 200990547 H1TF2 TRANSFAC yes 118431121
chr1 200990543 200990547 NFE TRANSFAC yes 118431122
chr1 200990543 200990547 SRF TRANSFAC yes 118431123
chr1 200990568 200990582 GLIS2 JASPAR yes 34478691
chr1 200990568 200990582 GLIS2 JASPAR yes 118431124
chr1 200990572 200990592 ESR1 JASPAR yes 34478692
chr1 200990572 200990592 ESR1 JASPAR yes 118431125
chr1 200990576 200990594 ESR1 JASPAR yes 34478693
chr1 200990576 200990594 ESR2 JASPAR yes 34478694
chr1 200990576 200990594 ESR1 JASPAR yes 118431126
chr1 200990576 200990594 ESR2 JASPAR yes 118431127
chr1 200990577 200990592 ESR2 JASPAR yes 34478695
chr1 200990577 200990592 ESR2 JASPAR yes 118431128
chr1 200990578 200990582 LFA1 TRANSFAC yes 34478696
chr1 200990578 200990582 LFA1 TRANSFAC yes 118431129
chr1 200990590 200990599 NKX3-2 JASPAR yes 34478697
chr1 200990590 200990599 NKX3-2 JASPAR yes 118431130
chr1 200990592 200990612 ESR1 JASPAR yes 34478698
chr1 200990592 200990612 ESR1 JASPAR yes 118431131
chr1 200990596 200990614 ESR2 JASPAR yes 34478699
chr1 200990596 200990614 ESR2 JASPAR yes 118431132
chr1 200990597 200990617 ESR1 JASPAR yes 34478700
chr1 200990597 200990617 ESR1 JASPAR yes 118431133
chr1 200990598 200990602 LFA1 TRANSFAC yes 34478701
chr1 200990598 200990602 LFA1 TRANSFAC yes 118431134
chr1 200990625 200990635 MAX JASPAR yes 34478702
chr1 200990625 200990635 MAX JASPAR yes 118431135
SNP sites on vista4534[chr1:200990087-200990628]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 200990139 rs534200834 G A
CTCF EGR1 TFAP2A TFAP2B TFAP2C
850830
chr1 200990338 rs11587290 C T
CTCF EGR1 SP1
850831
chr1 200990428 rs58480623 T A
CTCF
850832
chr1 200990617 rs114156979 C T
ESR1
850833
Genes possibly regulated by vista4534[chr1:200990087-200990628]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 200938520 200992828 - KIF21B ENSG00000116852.10 200992828 0.89 1.0 1698 97800
chr1 201008642 201081694 - CACNA1S ENSG00000081248.6 201081694 0.99 1.0 1699 8934
Expression level of Genes
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miRNAs possibly regulated by vista4534[chr1:200990087-200990628]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results