EnhancerDB
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  3. vista45342[chr4:88443267-88443740]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45342[chr4:88443267-88443740]
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Tissue distribution of vista45342
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Transcription factor that possibly regulate vista45342[chr4:88443267-88443740]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 88443190 88443360 EBF1 UCSC Txn Factor no Conserved 108533074
chr4 88443255 88443271 POU4F3 JASPAR yes 49255969
chr4 88443255 88443271 POU4F3 JASPAR yes 91124070
chr4 88443262 88443272 GSX1 JASPAR yes 49255970
chr4 88443262 88443272 GSX2 JASPAR yes 49255971
chr4 88443262 88443272 HOXB3 JASPAR yes 49255972
chr4 88443262 88443272 POU6F1 JASPAR yes 49255973
chr4 88443262 88443272 GSX1 JASPAR yes 91124071
chr4 88443262 88443272 GSX2 JASPAR yes 91124072
chr4 88443262 88443272 HOXB3 JASPAR yes 91124073
chr4 88443262 88443272 POU6F1 JASPAR yes 91124074
chr4 88443263 88443271 NKX6-1 JASPAR yes 49255974
chr4 88443263 88443271 NKX6-2 JASPAR yes 49255975
chr4 88443263 88443271 NKX6-1 JASPAR yes 91124075
chr4 88443263 88443271 NKX6-2 JASPAR yes 91124076
chr4 88443263 88443273 POU6F2 JASPAR yes 49255976
chr4 88443263 88443273 POU6F2 JASPAR yes 91124077
chr4 88443269 88443283 EBF1 JASPAR yes 49255977
chr4 88443269 88443283 EBF1 JASPAR yes 91124078
chr4 88443271 88443282 EBF1 JASPAR yes 49255978
chr4 88443271 88443282 EBF1 JASPAR yes 91124079
chr4 88443275 88443280 TFAP2A TRANSFAC yes 49255979
chr4 88443275 88443280 TFAP2A TRANSFAC yes 91124080
chr4 88443275 88443281 MZF1 JASPAR yes 49255980
chr4 88443275 88443281 MZF1 JASPAR yes 91124081
chr4 88443330 88443345 MEF2A JASPAR yes 49255981
chr4 88443330 88443345 MEF2A JASPAR yes 91124082
chr4 88443331 88443346 MEF2C JASPAR yes 49255982
chr4 88443331 88443346 MEF2C JASPAR yes 91124083
chr4 88443332 88443344 MEF2A JASPAR yes 49255983
chr4 88443332 88443344 MEF2D JASPAR yes 49255984
chr4 88443332 88443344 MEF2A JASPAR yes 91124084
chr4 88443332 88443344 MEF2D JASPAR yes 91124085
chr4 88443334 88443338 YY1 TRANSFAC yes 49255985
chr4 88443334 88443338 YY1 TRANSFAC yes 91124086
chr4 88443344 88443365 MAFG JASPAR yes 49255986
chr4 88443344 88443365 MAFG JASPAR yes 91124087
chr4 88443348 88443359 NFE2L2 JASPAR yes 49255987
chr4 88443348 88443359 NFE2L2 JASPAR yes 91124088
chr4 88443349 88443360 FOS JASPAR yes 49255988
chr4 88443349 88443360 FOSL1 JASPAR yes 49255989
chr4 88443349 88443360 JUND JASPAR yes 49255990
chr4 88443349 88443360 FOS JASPAR yes 91124089
chr4 88443349 88443360 FOSL1 JASPAR yes 91124090
chr4 88443349 88443360 JUND JASPAR yes 91124091
chr4 88443350 88443361 FOSL2 JASPAR yes 49255991
chr4 88443350 88443361 JUNB JASPAR yes 49255992
chr4 88443350 88443361 FOSL2 JASPAR yes 91124092
chr4 88443350 88443361 JUNB JASPAR yes 91124093
chr4 88443350 88443364 JUN JASPAR yes 49255993
chr4 88443350 88443364 JUN JASPAR yes 91124094
chr4 88443363 88443370 JUN TRANSFAC yes 49255994
chr4 88443363 88443370 JUN TRANSFAC yes 91124095
chr4 88443363 88443379 T JASPAR yes 49255995
chr4 88443363 88443379 T JASPAR yes 91124096
chr4 88443363 88443380 RARA JASPAR yes 49255996
chr4 88443363 88443380 RARA JASPAR yes 91124097
chr4 88443366 88443386 ESR1 JASPAR yes 49255997
chr4 88443366 88443386 ESR1 JASPAR yes 91124098
chr4 88443369 88443387 ESR1 JASPAR yes 49255998
chr4 88443369 88443387 ESR1 JASPAR yes 91124099
chr4 88443420 88443440 TP53 JASPAR yes 49255999
chr4 88443420 88443440 TP53 JASPAR yes 91124100
chr4 88443432 88443436 LFA1 TRANSFAC yes 49256000
chr4 88443432 88443436 LFA1 TRANSFAC yes 91124101
chr4 88443433 88443444 USF1 JASPAR yes 49256001
chr4 88443433 88443444 USF1 JASPAR yes 91124102
chr4 88443435 88443448 NR2F1 JASPAR yes 49256002
chr4 88443435 88443448 NR2F1 JASPAR yes 91124103
chr4 88443437 88443448 ESRRA JASPAR yes 49256003
chr4 88443437 88443448 ESRRB JASPAR yes 49256004
chr4 88443437 88443448 ESRRA JASPAR yes 91124104
chr4 88443437 88443448 ESRRB JASPAR yes 91124105
chr4 88443438 88443446 NR4A2 JASPAR yes 49256005
chr4 88443438 88443446 NR4A2 JASPAR yes 91124106
chr4 88443439 88443449 RORA JASPAR yes 49256006
chr4 88443439 88443449 RORA JASPAR yes 91124107
chr4 88443444 88443465 ZNF263 JASPAR yes 49256007
chr4 88443444 88443465 ZNF263 JASPAR yes 91124108
chr4 88443445 88443462 RXRA JASPAR yes 49256008
chr4 88443445 88443462 RXRA JASPAR yes 91124109
chr4 88443460 88443468 EHF JASPAR yes 49256009
chr4 88443460 88443468 EHF JASPAR yes 91124110
chr4 88443464 88443474 ALX3 JASPAR yes 49256010
chr4 88443464 88443474 ALX3 JASPAR yes 91124111
chr4 88443465 88443473 LHX9 JASPAR yes 49256011
chr4 88443465 88443473 SHOX JASPAR yes 49256012
chr4 88443465 88443473 LHX9 JASPAR yes 91124112
chr4 88443465 88443473 SHOX JASPAR yes 91124113
chr4 88443467 88443485 RARA JASPAR yes 49256013
chr4 88443467 88443485 RARA JASPAR yes 91124114
chr4 88443468 88443473 MYB TRANSFAC yes 49256014
chr4 88443468 88443473 MYB TRANSFAC yes 91124115
chr4 88443500 88443505 GATA2 JASPAR yes 49256015
chr4 88443500 88443505 GATA2 JASPAR yes 91124116
chr4 88443502 88443522 TP53 JASPAR yes 49256016
chr4 88443502 88443522 TP53 JASPAR yes 91124117
chr4 88443504 88443524 TP63 JASPAR yes 49256017
chr4 88443504 88443524 TP63 JASPAR yes 91124118
chr4 88443505 88443523 TP53 JASPAR yes 49256018
chr4 88443505 88443523 TP73 JASPAR yes 49256019
chr4 88443505 88443523 TP53 JASPAR yes 91124119
chr4 88443505 88443523 TP73 JASPAR yes 91124120
chr4 88443510 88443514 ESR1 TRANSFAC yes 49256020
chr4 88443510 88443514 ESR1 TRANSFAC yes 91124121
chr4 88443536 88443539 MYB TRANSFAC yes 49256021
chr4 88443536 88443539 MYB TRANSFAC yes 91124122
chr4 88443569 88443573 YY1 TRANSFAC yes 49256022
chr4 88443569 88443573 YY1 TRANSFAC yes 91124123
chr4 88443578 88443584 JUN TRANSFAC yes 49256023
chr4 88443578 88443584 JUN TRANSFAC yes 91124124
chr4 88443579 88443591 PBX1 JASPAR yes 49256024
chr4 88443579 88443591 PBX1 JASPAR yes 91124125
chr4 88443587 88443598 ESRRA JASPAR yes 49256025
chr4 88443587 88443598 ESRRA JASPAR yes 91124126
chr4 88443591 88443595 LFA1 TRANSFAC yes 49256026
chr4 88443591 88443595 LFA1 TRANSFAC yes 91124127
chr4 88443600 88443604 YY1 TRANSFAC yes 49256027
chr4 88443600 88443604 YY1 TRANSFAC yes 91124128
chr4 88443613 88443618 ETS2 TRANSFAC yes 49256028
chr4 88443613 88443618 ETS2 TRANSFAC yes 91124129
chr4 88443624 88443636 POU2F1 JASPAR yes 49256029
chr4 88443624 88443636 POU2F1 JASPAR yes 91124130
chr4 88443624 88443637 POU3F3 JASPAR yes 49256030
chr4 88443624 88443637 POU3F3 JASPAR yes 91124131
chr4 88443625 88443637 POU3F1 JASPAR yes 49256031
chr4 88443625 88443637 POU3F1 JASPAR yes 91124132
chr4 88443631 88443644 POU3F3 JASPAR yes 49256032
chr4 88443631 88443644 POU3F3 JASPAR yes 91124133
chr4 88443632 88443644 POU2F1 JASPAR yes 49256033
chr4 88443632 88443644 POU2F1 JASPAR yes 91124134
chr4 88443651 88443662 ESRRA JASPAR yes 49256034
chr4 88443651 88443662 ESRRA JASPAR yes 91124135
chr4 88443709 88443724 TFAP2C JASPAR yes 49256035
chr4 88443709 88443724 TFAP2C JASPAR yes 91124136
SNP sites on vista45342[chr4:88443267-88443740]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 88443344 rs35092607 T C
EBF1 MAFG MEF2A MEF2C MEF2D
7672151
chr4 88443436 rs114860211 C T
LFA1 NR2F1 TP53 USF1
7672152
chr4 88443443 rs17705268 C G
ESRRA ESRRB NR2F1 NR4A2 RORA USF1
7672153
chr4 88443470 rs17012774 T C,G
ALX3 LHX9 MYB RARA SHOX
7672154
chr4 88443582 rs17012777 A G
JUN PBX1
7672155
chr4 88443590 rs55886259 A G
ESRRA PBX1
7672156
chr4 88443594 rs114302196 G T
ESRRA LFA1
7672157
chr4 88443647 rs148520993 A C no 7672158
chr4 88443685 rs17012782 A G no 7672159
Genes possibly regulated by vista45342[chr4:88443267-88443740]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 88343734 88380606 + NUDT9 ENSG00000170502.8 88343734 0.71 0.99 4852 467
chr4 88394487 88452213 - SPARCL1 ENSG00000152583.8 88452213 0.88 1.0 4853 91527
chr4 88529681 88538062 + DSPP ENSG00000152591.8 88529681 0.89 0.96 4854 14059
Expression level of Genes
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miRNAs possibly regulated by vista45342[chr4:88443267-88443740]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results