EnhancerDB
  1. Home
  2. SNP
  3. rs17012774[chr4:88443470]
Enhancers that have rs17012774[chr4:88443470]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 88437265 88449055 enh8083
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Heart
chr4 88443267 88443740 vista45342
VISTA
Transcript factors that have rs17012774[chr4:88443470]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 88443464 88443474 ALX3 JASPAR yes 49256010
chr4 88443464 88443474 ALX3 JASPAR yes 91124111
chr4 88443465 88443473 LHX9 JASPAR yes 49256011
chr4 88443465 88443473 SHOX JASPAR yes 49256012
chr4 88443465 88443473 LHX9 JASPAR yes 91124112
chr4 88443465 88443473 SHOX JASPAR yes 91124113
chr4 88443467 88443485 RARA JASPAR yes 49256013
chr4 88443467 88443485 RARA JASPAR yes 91124114
chr4 88443468 88443473 MYB TRANSFAC yes 49256014
chr4 88443468 88443473 MYB TRANSFAC yes 91124115
Genes associated with rs17012774[chr4:88443470], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More