EnhancerDB
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  3. vista45343[chr4:88446974-88447282]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45343[chr4:88446974-88447282]
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Tissue distribution of vista45343
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Transcription factor that possibly regulate vista45343[chr4:88446974-88447282]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 88446980 88446995 SOX21 JASPAR yes 49256036
chr4 88446980 88446995 SOX21 JASPAR yes 91124605
chr4 88446980 88446996 SOX4 JASPAR yes 49256037
chr4 88446980 88446996 SOX4 JASPAR yes 91124606
chr4 88446984 88447003 RFX2 JASPAR yes 49256038
chr4 88446984 88447003 RFX2 JASPAR yes 91124607
chr4 88446988 88447004 RFX2 JASPAR yes 49256039
chr4 88446988 88447004 RFX3 JASPAR yes 49256040
chr4 88446988 88447004 RFX4 JASPAR yes 49256041
chr4 88446988 88447004 RFX5 JASPAR yes 49256042
chr4 88446988 88447004 RFX2 JASPAR yes 91124608
chr4 88446988 88447004 RFX3 JASPAR yes 91124609
chr4 88446988 88447004 RFX4 JASPAR yes 91124610
chr4 88446988 88447004 RFX5 JASPAR yes 91124611
chr4 88446989 88447008 RFX2 JASPAR yes 49256043
chr4 88446989 88447008 RFX2 JASPAR yes 91124612
chr4 88447022 88447037 MEF2C JASPAR yes 49256044
chr4 88447022 88447037 MEF2C JASPAR yes 91124613
chr4 88447042 88447046 YY1 TRANSFAC yes 49256045
chr4 88447042 88447046 YY1 TRANSFAC yes 91124614
chr4 88447077 88447097 RREB1 JASPAR yes 49256046
chr4 88447077 88447097 RREB1 JASPAR yes 91124615
chr4 88447081 88447101 RREB1 JASPAR yes 49256047
chr4 88447081 88447101 RREB1 JASPAR yes 91124616
chr4 88447088 88447094 SOX10 JASPAR yes 49256048
chr4 88447088 88447094 SOX10 JASPAR yes 91124617
chr4 88447093 88447108 FOXP1 JASPAR yes 49256049
chr4 88447093 88447108 FOXP1 JASPAR yes 91124618
chr4 88447096 88447107 FOXP2 JASPAR yes 49256050
chr4 88447096 88447107 FOXP2 JASPAR yes 91124619
chr4 88447098 88447113 FOXP1 JASPAR yes 49256051
chr4 88447098 88447113 FOXP1 JASPAR yes 91124620
chr4 88447113 88447128 PRDM1 JASPAR yes 49256052
chr4 88447113 88447128 PRDM1 JASPAR yes 91124621
chr4 88447138 88447145 SPIB JASPAR yes 49256053
chr4 88447138 88447145 SPIB JASPAR yes 91124622
chr4 88447149 88447154 GATA2 JASPAR yes 49256054
chr4 88447149 88447154 GATA2 JASPAR yes 91124623
chr4 88447151 88447166 TFAP2A JASPAR yes 49256055
chr4 88447151 88447166 TFAP2C JASPAR yes 49256056
chr4 88447151 88447166 TFAP2A JASPAR yes 91124624
chr4 88447151 88447166 TFAP2C JASPAR yes 91124625
chr4 88447152 88447163 EBF1 JASPAR yes 49256057
chr4 88447152 88447163 EBF1 JASPAR yes 91124626
chr4 88447191 88447205 GATA2 JASPAR yes 49256058
chr4 88447191 88447205 GATA2 JASPAR yes 91124627
chr4 88447193 88447201 GATA3 JASPAR yes 49256059
chr4 88447193 88447201 GATA5 JASPAR yes 49256060
chr4 88447193 88447201 GATA3 JASPAR yes 91124628
chr4 88447193 88447201 GATA5 JASPAR yes 91124629
chr4 88447205 88447211 HiNF-A TRANSFAC yes 49256061
chr4 88447205 88447211 HiNF-A TRANSFAC yes 91124630
chr4 88447214 88447227 NFKB1 JASPAR yes 49256062
chr4 88447214 88447227 NFKB2 JASPAR yes 49256063
chr4 88447214 88447227 NFKB1 JASPAR yes 91124631
chr4 88447214 88447227 NFKB2 JASPAR yes 91124632
chr4 88447215 88447225 NFKB1 JASPAR yes 49256064
chr4 88447215 88447225 RELA JASPAR yes 49256065
chr4 88447215 88447225 REL JASPAR yes 49256066
chr4 88447215 88447225 NFKB1 JASPAR yes 91124633
chr4 88447215 88447225 RELA JASPAR yes 91124634
chr4 88447215 88447225 REL JASPAR yes 91124635
chr4 88447215 88447226 NFKB1 JASPAR yes 49256067
chr4 88447215 88447226 NFKB1 JASPAR yes 91124636
chr4 88447219 88447230 E2F6 JASPAR yes 49256068
chr4 88447219 88447230 E2F6 JASPAR yes 91124637
chr4 88447231 88447241 NKX2-3 JASPAR yes 49256069
chr4 88447231 88447241 NKX2-3 JASPAR yes 91124638
chr4 88447234 88447249 NFYB JASPAR yes 49256070
chr4 88447234 88447249 NFYB JASPAR yes 91124639
chr4 88447239 88447250 CDX2 JASPAR yes 49256071
chr4 88447239 88447250 CDX2 JASPAR yes 91124640
chr4 88447240 88447251 HOXA10 JASPAR yes 49256072
chr4 88447240 88447251 HOXA10 JASPAR yes 91124641
chr4 88447241 88447245 H1TF2 TRANSFAC yes 49256073
chr4 88447241 88447245 NFE TRANSFAC yes 49256074
chr4 88447241 88447245 SRF TRANSFAC yes 49256075
chr4 88447241 88447245 H1TF2 TRANSFAC yes 91124642
chr4 88447241 88447245 NFE TRANSFAC yes 91124643
chr4 88447241 88447245 SRF TRANSFAC yes 91124644
chr4 88447241 88447250 CDX1 JASPAR yes 49256076
chr4 88447241 88447250 CDX1 JASPAR yes 91124645
chr4 88447241 88447251 HOXA13 JASPAR yes 49256077
chr4 88447241 88447251 HOXB13 JASPAR yes 49256078
chr4 88447241 88447251 HOXD13 JASPAR yes 49256079
chr4 88447241 88447251 HOXA13 JASPAR yes 91124646
chr4 88447241 88447251 HOXB13 JASPAR yes 91124647
chr4 88447241 88447251 HOXD13 JASPAR yes 91124648
chr4 88447255 88447262 MEIS1 JASPAR yes 49256080
chr4 88447255 88447262 MEIS1 JASPAR yes 91124649
chr4 88447255 88447263 MEIS2 JASPAR yes 49256081
chr4 88447255 88447263 MEIS3 JASPAR yes 49256082
chr4 88447255 88447263 MEIS2 JASPAR yes 91124650
chr4 88447255 88447263 MEIS3 JASPAR yes 91124651
chr4 88447270 88447274 YY1 TRANSFAC yes 49256083
chr4 88447270 88447274 YY1 TRANSFAC yes 91124652
SNP sites on vista45343[chr4:88446974-88447282]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 88447104 rs536797746 C CA
FOXP1 FOXP2
7672206
chr4 88447104 rs565619790 C A
FOXP1 FOXP2
7672207
chr4 88447104 rs60379878 CA C
FOXP1 FOXP2
7672208
chr4 88447104 rs796762094 CA C
FOXP1 FOXP2
7672209
chr4 88447105 rs6814787 A C
FOXP1 FOXP2
7672210
chr4 88447128 rs6814797 A G
PRDM1
7672211
chr4 88447221 rs6840772 T C
E2F6 NFKB1 NFKB2 REL RELA
7672212
Genes possibly regulated by vista45343[chr4:88446974-88447282]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 88394487 88452213 - SPARCL1 ENSG00000152583.8 88452213 0.88 1.0 4853 95069
chr4 88529681 88538062 + DSPP ENSG00000152591.8 88529681 0.89 0.96 4854 17601
Expression level of Genes
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miRNAs possibly regulated by vista45343[chr4:88446974-88447282]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results