EnhancerDB
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  3. rs6840772[chr4:88447221]
Enhancers that have rs6840772[chr4:88447221]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 88437265 88449055 enh8083
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Heart
chr4 88446974 88447282 vista45343
VISTA
Transcript factors that have rs6840772[chr4:88447221]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 88447214 88447227 NFKB1 JASPAR yes 49256062
chr4 88447214 88447227 NFKB2 JASPAR yes 49256063
chr4 88447214 88447227 NFKB1 JASPAR yes 91124631
chr4 88447214 88447227 NFKB2 JASPAR yes 91124632
chr4 88447215 88447225 NFKB1 JASPAR yes 49256064
chr4 88447215 88447225 RELA JASPAR yes 49256065
chr4 88447215 88447225 REL JASPAR yes 49256066
chr4 88447215 88447225 NFKB1 JASPAR yes 91124633
chr4 88447215 88447225 RELA JASPAR yes 91124634
chr4 88447215 88447225 REL JASPAR yes 91124635
chr4 88447215 88447226 NFKB1 JASPAR yes 49256067
chr4 88447215 88447226 NFKB1 JASPAR yes 91124636
chr4 88447219 88447230 E2F6 JASPAR yes 49256068
chr4 88447219 88447230 E2F6 JASPAR yes 91124637
Genes associated with rs6840772[chr4:88447221], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More