EnhancerDB
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  3. vista45353[chr4:88787227-88787597]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45353[chr4:88787227-88787597]
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Tissue distribution of vista45353
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Transcription factor that possibly regulate vista45353[chr4:88787227-88787597]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 88787149 88787722 EP300 UCSC Txn Factor no Conserved 108533079
chr4 88787191 88787656 NFIC UCSC Txn Factor no Conserved 108533080
chr4 88787284 88787684 SP1 UCSC Txn Factor no Conserved 108533081
chr4 88787300 88787617 FOXA2 UCSC Txn Factor no Conserved 108533082
chr4 88787304 88787663 TEAD4 UCSC Txn Factor no Conserved 108533083
chr4 88787309 88787601 FOXA1 UCSC Txn Factor no Conserved 108533084
chr4 88787354 88787610 MAFK UCSC Txn Factor no Conserved 108533085
chr4 88787414 88787563 MAFF UCSC Txn Factor no Conserved 108533086
chr4 88787212 88787227 MEF2A JASPAR yes 49256547
chr4 88787212 88787227 MEF2A JASPAR yes 91135823
chr4 88787226 88787232 SOX10 JASPAR yes 49256548
chr4 88787226 88787232 SOX10 JASPAR yes 91135824
chr4 88787230 88787236 GATA3 JASPAR yes 49256549
chr4 88787230 88787236 GATA3 JASPAR yes 91135825
chr4 88787249 88787255 MZF1 JASPAR yes 49256550
chr4 88787249 88787255 MZF1 JASPAR yes 91135826
chr4 88787250 88787261 EBF1 JASPAR yes 49256551
chr4 88787250 88787261 EBF1 JASPAR yes 91135827
chr4 88787250 88787264 PLAG1 JASPAR yes 49256552
chr4 88787250 88787264 PLAG1 JASPAR yes 91135828
chr4 88787271 88787279 FEV JASPAR yes 49256553
chr4 88787271 88787279 FEV JASPAR yes 91135829
chr4 88787271 88787284 JUN JASPAR yes 49256554
chr4 88787271 88787284 JUN JASPAR yes 91135830
chr4 88787282 88787287 ETS2 TRANSFAC yes 49256555
chr4 88787282 88787287 ETS2 TRANSFAC yes 91135831
chr4 88787282 88787292 TEAD4 JASPAR yes 49256556
chr4 88787282 88787292 TEAD4 JASPAR yes 91135832
chr4 88787283 88787294 NFKB1 JASPAR yes 49256557
chr4 88787283 88787294 NFKB1 JASPAR yes 91135833
chr4 88787284 88787293 NF-kappaB TRANSFAC yes 49256558
chr4 88787284 88787293 NF-kappaB TRANSFAC yes 91135834
chr4 88787285 88787296 FLI1 JASPAR yes 49256559
chr4 88787285 88787296 FLI1 JASPAR yes 91135835
chr4 88787286 88787296 ERF JASPAR yes 49256560
chr4 88787286 88787296 ERG JASPAR yes 49256561
chr4 88787286 88787296 ETS1 JASPAR yes 49256562
chr4 88787286 88787296 FLI1 JASPAR yes 49256563
chr4 88787286 88787296 ERF JASPAR yes 91135836
chr4 88787286 88787296 ERG JASPAR yes 91135837
chr4 88787286 88787296 ETS1 JASPAR yes 91135838
chr4 88787286 88787296 FLI1 JASPAR yes 91135839
chr4 88787286 88787297 ETV2 JASPAR yes 49256564
chr4 88787286 88787297 ETV2 JASPAR yes 91135840
chr4 88787287 88787295 FEV JASPAR yes 49256565
chr4 88787287 88787295 FEV JASPAR yes 91135841
chr4 88787355 88787367 GRHL1 JASPAR yes 49256566
chr4 88787355 88787367 GRHL1 JASPAR yes 91135842
chr4 88787356 88787359 MYB TRANSFAC yes 49256567
chr4 88787356 88787359 MYB TRANSFAC yes 91135843
chr4 88787367 88787387 TBX19 JASPAR yes 49256568
chr4 88787367 88787387 TBX19 JASPAR yes 91135844
chr4 88787372 88787381 ZEB1 JASPAR yes 49256569
chr4 88787372 88787381 ZEB1 JASPAR yes 91135845
chr4 88787376 88787389 NR2F1 JASPAR yes 49256570
chr4 88787376 88787389 NR2F1 JASPAR yes 91135846
chr4 88787377 88787392 HNF4G JASPAR yes 49256571
chr4 88787377 88787392 HNF4G JASPAR yes 91135847
chr4 88787378 88787392 RXRB JASPAR yes 49256572
chr4 88787378 88787392 RXRB JASPAR yes 91135848
chr4 88787378 88787393 HNF4A JASPAR yes 49256573
chr4 88787378 88787393 HNF4A JASPAR yes 91135849
chr4 88787380 88787384 ESR1 TRANSFAC yes 49256574
chr4 88787380 88787384 ESR1 TRANSFAC yes 91135850
chr4 88787402 88787417 NR2C2 JASPAR yes 49256575
chr4 88787402 88787417 NR2C2 JASPAR yes 91135851
chr4 88787431 88787435 YY1 TRANSFAC yes 49256576
chr4 88787431 88787435 YY1 TRANSFAC yes 91135852
chr4 88787436 88787441 H4TF1 TRANSFAC yes 49256577
chr4 88787436 88787441 H4TF1 TRANSFAC yes 91135853
chr4 88787439 88787453 SPIC JASPAR yes 49256578
chr4 88787439 88787453 SPIC JASPAR yes 91135854
chr4 88787442 88787449 SPIB JASPAR yes 49256579
chr4 88787442 88787449 SPIB JASPAR yes 91135855
chr4 88787446 88787461 FOXA1 JASPAR yes 49256580
chr4 88787446 88787461 FOXA1 JASPAR yes 91135856
chr4 88787447 88787462 FOXP1 JASPAR yes 49256581
chr4 88787447 88787462 FOXP1 JASPAR yes 91135857
chr4 88787448 88787459 FOXP2 JASPAR yes 49256582
chr4 88787448 88787459 FOXP2 JASPAR yes 91135858
chr4 88787448 88787460 FOXC2 JASPAR yes 49256583
chr4 88787448 88787460 FOXC2 JASPAR yes 91135859
chr4 88787448 88787462 FOXF2 JASPAR yes 49256584
chr4 88787448 88787462 FOXF2 JASPAR yes 91135860
chr4 88787449 88787457 FOXD1 JASPAR yes 49256585
chr4 88787449 88787457 FOXG1 JASPAR yes 49256586
chr4 88787449 88787457 FOXO3 JASPAR yes 49256587
chr4 88787449 88787457 FOXD1 JASPAR yes 91135861
chr4 88787449 88787457 FOXG1 JASPAR yes 91135862
chr4 88787449 88787457 FOXO3 JASPAR yes 91135863
chr4 88787449 88787460 FOXB1 JASPAR yes 49256588
chr4 88787449 88787460 FOXC1 JASPAR yes 49256589
chr4 88787449 88787460 FOXB1 JASPAR yes 91135864
chr4 88787449 88787460 FOXC1 JASPAR yes 91135865
chr4 88787450 88787457 FOXD2 JASPAR yes 49256590
chr4 88787450 88787457 FOXI1 JASPAR yes 49256591
chr4 88787450 88787457 FOXL1 JASPAR yes 49256592
chr4 88787450 88787457 FOXO4 JASPAR yes 49256593
chr4 88787450 88787457 FOXO6 JASPAR yes 49256594
chr4 88787450 88787457 FOXP3 JASPAR yes 49256595
chr4 88787450 88787457 FOXD2 JASPAR yes 91135866
chr4 88787450 88787457 FOXI1 JASPAR yes 91135867
chr4 88787450 88787457 FOXL1 JASPAR yes 91135868
chr4 88787450 88787457 FOXO4 JASPAR yes 91135869
chr4 88787450 88787457 FOXO6 JASPAR yes 91135870
chr4 88787450 88787457 FOXP3 JASPAR yes 91135871
chr4 88787450 88787461 FOXA1 JASPAR yes 49256596
chr4 88787450 88787461 FOXA1 JASPAR yes 91135872
chr4 88787458 88787465 JUN TRANSFAC yes 49256597
chr4 88787458 88787465 JUN TRANSFAC yes 91135873
chr4 88787474 88787485 NFE2L2 JASPAR yes 49256598
chr4 88787474 88787485 NFE2L2 JASPAR yes 91135874
chr4 88787504 88787508 YY1 TRANSFAC yes 49256599
chr4 88787504 88787508 YY1 TRANSFAC yes 91135875
chr4 88787504 88787525 ZNF263 JASPAR yes 49256600
chr4 88787504 88787525 ZNF263 JASPAR yes 91135876
chr4 88787512 88787515 MYB TRANSFAC yes 49256601
chr4 88787512 88787515 MYB TRANSFAC yes 91135877
chr4 88787515 88787521 SP1 TRANSFAC yes 49256602
chr4 88787515 88787521 SP1 TRANSFAC yes 91135878
chr4 88787527 88787538 DMRT3 JASPAR yes 49256603
chr4 88787527 88787538 DMRT3 JASPAR yes 91135879
chr4 88787528 88787543 SCRT1 JASPAR yes 49256604
chr4 88787528 88787543 SCRT1 JASPAR yes 91135880
chr4 88787531 88787534 MYB TRANSFAC yes 49256605
chr4 88787531 88787534 MYB TRANSFAC yes 91135881
chr4 88787531 88787544 ZBTB18 JASPAR yes 49256606
chr4 88787531 88787544 ZBTB18 JASPAR yes 91135882
chr4 88787533 88787543 MAX JASPAR yes 49256607
chr4 88787533 88787543 MAX JASPAR yes 91135883
chr4 88787536 88787547 FOXH1 JASPAR yes 49256608
chr4 88787536 88787547 FOXH1 JASPAR yes 91135884
chr4 88787537 88787543 ZNF354C JASPAR yes 49256609
chr4 88787537 88787543 ZNF354C JASPAR yes 91135885
chr4 88787552 88787566 TCF7L2 JASPAR yes 49256610
chr4 88787552 88787566 TCF7L2 JASPAR yes 91135886
chr4 88787552 88787567 LEF1 JASPAR yes 49256611
chr4 88787552 88787567 LEF1 JASPAR yes 91135887
chr4 88787573 88787586 SCRT2 JASPAR yes 49256612
chr4 88787573 88787586 SCRT2 JASPAR yes 91135888
chr4 88787585 88787600 LEF1 JASPAR yes 49256613
chr4 88787585 88787600 LEF1 JASPAR yes 91135889
chr4 88787586 88787600 TCF7L2 JASPAR yes 49256614
chr4 88787586 88787600 TCF7L2 JASPAR yes 91135890
chr4 88787590 88787598 GATA3 JASPAR yes 49256615
chr4 88787590 88787598 GATA3 JASPAR yes 91135891
SNP sites on vista45353[chr4:88787227-88787597]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 88787247 rs567949821 ACTTCCCCAGGAGGCCTCCCACACAATTT A
EP300 NFIC
7673335
chr4 88787249 rs4693189 T C
EP300 MZF1 NFIC
7673336
chr4 88787350 rs13107310 G T
EP300 FOXA1 FOXA2 NFIC SP1 TEAD4
7673337
chr4 88787368 rs117645650 C G,T
EP300 FOXA1 FOXA2 MAFK NFIC SP1 TBX19 TEAD4
7673338
chr4 88787439 rs6821260 T C
EP300 FOXA1 FOXA2 H4TF1 MAFF MAFK NFIC SP1 SPIC TEAD4
7673339
chr4 88787499 rs28758373 A G
EP300 FOXA1 FOXA2 MAFF MAFK NFIC SP1 TEAD4
7673340
chr4 88787535 rs13107383 C A
DMRT3 EP300 FOXA1 FOXA2 MAFF MAFK MAX NFIC SCRT1 SP1 TEAD4 ZBTB18
7673341
chr4 88787553 rs147878550 G C
EP300 FOXA1 FOXA2 LEF1 MAFF MAFK NFIC SP1 TCF7L2 TEAD4
7673342
chr4 88787560 rs117676857 A G
EP300 FOXA1 FOXA2 LEF1 MAFF MAFK NFIC SP1 TCF7L2 TEAD4
7673343
Genes possibly regulated by vista45353[chr4:88787227-88787597]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 88720733 88733074 + IBSP ENSG00000029559.5 88720733 0.94 1.0 4856 33506
chr4 88742563 88767969 + MEPE ENSG00000152595.12 88742563 0.93 1.0 4857 55336
Expression level of Genes
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miRNAs possibly regulated by vista45353[chr4:88787227-88787597]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results