EnhancerDB
  1. Home
  2. Enhancers
  3. vista4542[chr1:201246115-201246382]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4542[chr1:201246115-201246382]
Back to top
Tissue distribution of vista4542
Back to top
Transcription factor that possibly regulate vista4542[chr1:201246115-201246382]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 201246126 201246132 NFIC JASPAR yes 34485907
chr1 201246126 201246132 NFIC JASPAR yes 118431432
chr1 201246135 201246140 SP1 TRANSFAC yes 34485908
chr1 201246135 201246140 SP1 TRANSFAC yes 118431433
chr1 201246136 201246141 SP1 TRANSFAC yes 34485909
chr1 201246136 201246141 SP1 TRANSFAC yes 118431434
chr1 201246155 201246166 NRL JASPAR yes 34485910
chr1 201246155 201246166 NRL JASPAR yes 118431435
chr1 201246162 201246174 PKNOX1 JASPAR yes 34485911
chr1 201246162 201246174 PKNOX2 JASPAR yes 34485912
chr1 201246162 201246174 TGIF1 JASPAR yes 34485913
chr1 201246162 201246174 TGIF2 JASPAR yes 34485914
chr1 201246162 201246174 PKNOX1 JASPAR yes 118431436
chr1 201246162 201246174 PKNOX2 JASPAR yes 118431437
chr1 201246162 201246174 TGIF1 JASPAR yes 118431438
chr1 201246162 201246174 TGIF2 JASPAR yes 118431439
chr1 201246182 201246192 SP1 JASPAR yes 34485915
chr1 201246182 201246192 SP1 JASPAR yes 118431440
chr1 201246192 201246198 TCF4 TRANSFAC yes 34485916
chr1 201246192 201246198 TCF4 TRANSFAC yes 118431441
chr1 201246207 201246224 RXRA JASPAR yes 34485917
chr1 201246207 201246224 RXRA JASPAR yes 118431442
chr1 201246209 201246230 ZNF263 JASPAR yes 34485918
chr1 201246209 201246230 ZNF263 JASPAR yes 118431443
chr1 201246210 201246230 RREB1 JASPAR yes 34485919
chr1 201246210 201246230 RREB1 JASPAR yes 118431444
chr1 201246211 201246231 RREB1 JASPAR yes 34485920
chr1 201246211 201246231 RREB1 JASPAR yes 118431445
chr1 201246213 201246233 RREB1 JASPAR yes 34485921
chr1 201246213 201246233 RREB1 JASPAR yes 118431446
chr1 201246214 201246228 PLAG1 JASPAR yes 34485922
chr1 201246214 201246228 PLAG1 JASPAR yes 118431447
chr1 201246214 201246234 RREB1 JASPAR yes 34485923
chr1 201246214 201246234 RREB1 JASPAR yes 118431448
chr1 201246215 201246225 SP1 JASPAR yes 34485924
chr1 201246215 201246225 SP1 JASPAR yes 118431449
chr1 201246215 201246235 RREB1 JASPAR yes 34485925
chr1 201246215 201246235 RREB1 JASPAR yes 118431450
chr1 201246216 201246226 SP1 JASPAR yes 34485926
chr1 201246216 201246226 SP1 JASPAR yes 118431451
chr1 201246216 201246236 RREB1 JASPAR yes 34485927
chr1 201246216 201246236 RREB1 JASPAR yes 118431452
chr1 201246218 201246238 RREB1 JASPAR yes 34485928
chr1 201246218 201246238 RREB1 JASPAR yes 118431453
chr1 201246220 201246230 SP1 JASPAR yes 34485929
chr1 201246220 201246230 SP1 JASPAR yes 118431454
chr1 201246220 201246240 RREB1 JASPAR yes 34485930
chr1 201246220 201246240 RREB1 JASPAR yes 118431455
chr1 201246224 201246234 SP1 JASPAR yes 34485931
chr1 201246224 201246234 SP1 JASPAR yes 118431456
chr1 201246295 201246302 E2F1 TRANSFAC yes 34485932
chr1 201246295 201246302 E2F1 TRANSFAC yes 118431457
chr1 201246303 201246320 RARA JASPAR yes 34485933
chr1 201246303 201246320 RARA JASPAR yes 118431458
chr1 201246368 201246371 MYB TRANSFAC yes 34485934
chr1 201246368 201246371 MYB TRANSFAC yes 118431459
chr1 201246378 201246384 TCF4 TRANSFAC yes 34485935
chr1 201246378 201246384 TCF4 TRANSFAC yes 118431460
SNP sites on vista4542[chr1:201246115-201246382]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 201246177 rs142804185 C T no 852180
chr1 201246190 rs144237270 G C
SP1
852181
chr1 201246227 rs4915504 C T
PLAG1 RREB1 SP1 ZNF263
852182
chr1 201246304 rs71635542 T C
RARA
852183
Genes possibly regulated by vista4542[chr1:201246115-201246382]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 201159953 201198080 + IGFN1 ENSG00000163395.12 201159953 0.99 1.0 1702 13838
chr1 201252580 201302121 + PKP1 ENSG00000081277.7 201252580 0.95 0.99 1703 93802
Expression level of Genes
Back to top
miRNAs possibly regulated by vista4542[chr1:201246115-201246382]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results