EnhancerDB
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  3. rs71635542[chr1:201246304]
Enhancers that have rs71635542[chr1:201246304]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201226502 201247275 enh12516
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Breast Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 201246115 201246382 vista4542
VISTA
Transcript factors that have rs71635542[chr1:201246304]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201246303 201246320 RARA JASPAR yes 34485933
chr1 201246303 201246320 RARA JASPAR yes 118431458
Genes associated with rs71635542[chr1:201246304], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More