EnhancerDB
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  3. vista4549[chr1:201426190-201426373]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4549[chr1:201426190-201426373]
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Tissue distribution of vista4549
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Transcription factor that possibly regulate vista4549[chr1:201426190-201426373]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 201426023 201426351 CEBPB UCSC Txn Factor no Conserved 107856193
chr1 201426198 201426209 CEBPA JASPAR yes 34495664
chr1 201426198 201426209 CEBPA JASPAR yes 118431600
chr1 201426199 201426209 CEBPB JASPAR yes 34495665
chr1 201426199 201426209 CEBPD JASPAR yes 34495666
chr1 201426199 201426209 CEBPE JASPAR yes 34495667
chr1 201426199 201426209 CEBPG JASPAR yes 34495668
chr1 201426199 201426209 CEBPB JASPAR yes 118431601
chr1 201426199 201426209 CEBPD JASPAR yes 118431602
chr1 201426199 201426209 CEBPE JASPAR yes 118431603
chr1 201426199 201426209 CEBPG JASPAR yes 118431604
chr1 201426199 201426210 CEBPB JASPAR yes 34495669
chr1 201426199 201426210 CEBPB JASPAR yes 118431605
chr1 201426209 201426224 PRDM1 JASPAR yes 34495670
chr1 201426209 201426224 PRDM1 JASPAR yes 118431606
chr1 201426241 201426247 SOX10 JASPAR yes 34495671
chr1 201426241 201426247 SOX10 JASPAR yes 118431607
chr1 201426246 201426257 TBX20 JASPAR yes 34495672
chr1 201426246 201426257 TBX20 JASPAR yes 118431608
chr1 201426260 201426271 NFE2 JASPAR yes 34495673
chr1 201426260 201426271 NFE2 JASPAR yes 118431609
chr1 201426261 201426272 FOSL2 JASPAR yes 34495674
chr1 201426261 201426272 FOSL2 JASPAR yes 118431610
chr1 201426265 201426271 YY1 JASPAR yes 34495675
chr1 201426265 201426271 YY1 JASPAR yes 118431611
chr1 201426281 201426293 MYBL1 JASPAR yes 34495676
chr1 201426281 201426293 MYBL1 JASPAR yes 118431612
chr1 201426306 201426317 NFE2L2 JASPAR yes 34495677
chr1 201426306 201426317 NFE2L2 JASPAR yes 118431613
chr1 201426324 201426328 H1TF2 TRANSFAC yes 34495678
chr1 201426324 201426328 NFE TRANSFAC yes 34495679
chr1 201426324 201426328 SRF TRANSFAC yes 34495680
chr1 201426324 201426328 H1TF2 TRANSFAC yes 118431614
chr1 201426324 201426328 NFE TRANSFAC yes 118431615
chr1 201426324 201426328 SRF TRANSFAC yes 118431616
chr1 201426358 201426373 FOXP1 JASPAR yes 34495681
chr1 201426358 201426373 FOXP1 JASPAR yes 118431617
chr1 201426365 201426382 RXRA JASPAR yes 34495682
chr1 201426365 201426382 RXRA JASPAR yes 118431618
SNP sites on vista4549[chr1:201426190-201426373]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 201426203 rs147903925 G A
CEBPA CEBPB CEBPD CEBPE CEBPG
853787
chr1 201426345 rs578044022 A G
CEBPB
853788
chr1 201426353 rs16848623 C T no 853789
Genes possibly regulated by vista4549[chr1:201426190-201426373]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 201328136 201346890 - TNNT2 ENSG00000118194.14 201346890 1.0 1.0 1704 20700
chr1 201342372 201368736 - LAD1 ENSG00000159166.9 201368736 0.9 1.0 1705 42546
chr1 201373625 201398994 - TNNI1 ENSG00000159173.14 201398994 0.98 0.97 1706 72804
chr1 201434620 201438365 - PHLDA3 ENSG00000174307.5 201438365 0.73 1.0 1707 88008
chr1 201452658 201478584 - CSRP1 ENSG00000159176.9 201478584 0.86 0.99 1708 47789
Expression level of Genes
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miRNAs possibly regulated by vista4549[chr1:201426190-201426373]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results