EnhancerDB
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Enhancers that have rs16848623[chr1:201426353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 201426190 201426373 vista4549
VISTA
Transcript factors that have rs16848623[chr1:201426353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201425948 201426498 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21364064
chr1 201425948 201426498 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856190
chr1 201425968 201426618 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21364065
chr1 201425968 201426618 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856191
chr1 201426029 201426409 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107856194
chr1 201426038 201426434 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21364066
chr1 201426038 201426434 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856195
chr1 201426066 201426476 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21364067
chr1 201426066 201426476 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107856197
chr1 201426078 201426354 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21364068
chr1 201426078 201426354 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107856198
chr1 201426159 201426419 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21364072
chr1 201426159 201426419 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856202
chr1 201426159 201426831 ZNF143 GTRD no Epithelial (MCF-7) 21364073
chr1 201426159 201426831 ZNF143 GTRD no Epithelial (MCF-7) 107856203
chr1 201426180 201426799 TCF7L2 GTRD no Colon (HCT116) 21364074
chr1 201426180 201426799 TCF7L2 GTRD no Colon (HCT116) 107856204
chr1 201426213 201426815 TCF7L2 GTRD no Colon (HCT116) 21364075
chr1 201426213 201426815 TCF7L2 GTRD no Colon (HCT116) 107856205
chr1 201426259 201426692 SOX2 GTRD no Neural Stem Cells (H9) 107856206
chr1 201426265 201426543 ZNF274 GTRD no Blood (GM12878) 107856207
chr1 201426337 201426677 ZNF274 GTRD no Blood (GM12878) 107856208
chr1 201426350 201426597 ZNF274 GTRD no Blood (GM12878) 107856209
Genes associated with rs16848623[chr1:201426353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More