EnhancerDB
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  3. vista4555[chr1:201472589-201472996]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4555[chr1:201472589-201472996]
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Tissue distribution of vista4555
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Transcription factor that possibly regulate vista4555[chr1:201472589-201472996]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 201472419 201473672 POLR2A UCSC Txn Factor no Conserved 107856482
chr1 201472618 201473255 EP300 UCSC Txn Factor no Conserved 107856509
chr1 201472625 201472987 JUN UCSC Txn Factor no Conserved 107856512
chr1 201472654 201472913 CEBPB UCSC Txn Factor no Conserved 107856524
chr1 201472655 201472911 FOXA1 UCSC Txn Factor no Conserved 107856525
chr1 201472681 201472882 SRF UCSC Txn Factor no Conserved 107856531
chr1 201472595 201472611 GLIS1 JASPAR yes 34499364
chr1 201472595 201472611 GLIS1 JASPAR yes 118431856
chr1 201472605 201472617 INSM1 JASPAR yes 34499365
chr1 201472605 201472617 INSM1 JASPAR yes 118431857
chr1 201472641 201472651 MSC JASPAR yes 34499366
chr1 201472641 201472651 MSC JASPAR yes 118431858
chr1 201472650 201472653 MYB TRANSFAC yes 34499367
chr1 201472650 201472653 MYB TRANSFAC yes 118431859
chr1 201472658 201472662 YY1 TRANSFAC yes 34499368
chr1 201472658 201472662 YY1 TRANSFAC yes 118431860
chr1 201472661 201472675 SPIC JASPAR yes 34499369
chr1 201472661 201472675 SPIC JASPAR yes 118431861
chr1 201472704 201472718 EBF1 JASPAR yes 34499370
chr1 201472704 201472718 EBF1 JASPAR yes 118431862
chr1 201472705 201472720 TFAP2C JASPAR yes 34499371
chr1 201472705 201472720 TFAP2C JASPAR yes 118431863
chr1 201472706 201472715 TFAP2A JASPAR yes 34499372
chr1 201472706 201472715 TFAP2A JASPAR yes 118431864
chr1 201472706 201472717 EBF1 JASPAR yes 34499373
chr1 201472706 201472717 EBF1 JASPAR yes 118431865
chr1 201472710 201472715 TFAP2A TRANSFAC yes 34499374
chr1 201472710 201472715 TFAP2A TRANSFAC yes 118431866
chr1 201472710 201472716 MZF1 JASPAR yes 34499375
chr1 201472710 201472716 MZF1 JASPAR yes 118431867
chr1 201472712 201472717 ETS2 TRANSFAC yes 34499376
chr1 201472712 201472717 ETS2 TRANSFAC yes 118431868
chr1 201472721 201472732 NFKB1 JASPAR yes 34499377
chr1 201472721 201472732 NFKB1 JASPAR yes 118431869
chr1 201472722 201472732 REL JASPAR yes 34499378
chr1 201472722 201472732 REL JASPAR yes 118431870
chr1 201472749 201472755 NFE2 TRANSFAC yes 34499379
chr1 201472749 201472755 NFE2 TRANSFAC yes 118431871
chr1 201472754 201472769 FOXA1 JASPAR yes 34499380
chr1 201472754 201472769 FOXA1 JASPAR yes 118431872
chr1 201472757 201472768 FOXB1 JASPAR yes 34499381
chr1 201472757 201472768 FOXC1 JASPAR yes 34499382
chr1 201472757 201472768 FOXB1 JASPAR yes 118431873
chr1 201472757 201472768 FOXC1 JASPAR yes 118431874
chr1 201472758 201472762 YY1 TRANSFAC yes 34499383
chr1 201472758 201472762 YY1 TRANSFAC yes 118431875
chr1 201472758 201472769 FOXA1 JASPAR yes 34499384
chr1 201472758 201472769 FOXA1 JASPAR yes 118431876
chr1 201472760 201472774 MTF1 JASPAR yes 34499385
chr1 201472760 201472774 MTF1 JASPAR yes 118431877
chr1 201472768 201472786 SRF JASPAR yes 34499386
chr1 201472768 201472786 SRF JASPAR yes 118431878
chr1 201472770 201472786 SRF JASPAR yes 34499387
chr1 201472770 201472786 SRF JASPAR yes 118431879
chr1 201472770 201472788 SRF JASPAR yes 34499388
chr1 201472770 201472788 SRF JASPAR yes 118431880
chr1 201472797 201472805 CREB1 JASPAR yes 34499389
chr1 201472797 201472805 CREB1 JASPAR yes 118431881
chr1 201472797 201472810 SMAD2 JASPAR yes 34499390
chr1 201472797 201472810 SMAD2 JASPAR yes 118431882
chr1 201472807 201472817 TEAD1 JASPAR yes 34499391
chr1 201472807 201472817 TEAD4 JASPAR yes 34499392
chr1 201472807 201472817 TEAD1 JASPAR yes 118431883
chr1 201472807 201472817 TEAD4 JASPAR yes 118431884
chr1 201472807 201472819 TEAD1 JASPAR yes 34499393
chr1 201472807 201472819 TEAD1 JASPAR yes 118431885
chr1 201472808 201472816 TEAD3 JASPAR yes 34499394
chr1 201472808 201472816 TEAD3 JASPAR yes 118431886
chr1 201472831 201472845 XBP1 JASPAR yes 34499395
chr1 201472831 201472845 XBP1 JASPAR yes 118431887
chr1 201472836 201472848 CREB1 JASPAR yes 34499396
chr1 201472836 201472848 CREB1 JASPAR yes 118431888
chr1 201472837 201472842 ATF1 TRANSFAC yes 34499397
chr1 201472837 201472842 ATF1 TRANSFAC yes 118431889
chr1 201472838 201472848 HOXA2 JASPAR yes 34499398
chr1 201472838 201472848 HOXA2 JASPAR yes 118431890
chr1 201472839 201472853 POU1F1 JASPAR yes 34499399
chr1 201472839 201472853 POU1F1 JASPAR yes 118431891
chr1 201472840 201472852 POU3F1 JASPAR yes 34499400
chr1 201472840 201472852 POU3F2 JASPAR yes 34499401
chr1 201472840 201472852 POU3F1 JASPAR yes 118431892
chr1 201472840 201472852 POU3F2 JASPAR yes 118431893
chr1 201472840 201472853 POU3F3 JASPAR yes 34499402
chr1 201472840 201472853 POU3F3 JASPAR yes 118431894
chr1 201472841 201472845 YY1 TRANSFAC yes 34499403
chr1 201472841 201472845 YY1 TRANSFAC yes 118431895
chr1 201472841 201472853 POU2F1 JASPAR yes 34499404
chr1 201472841 201472853 POU2F1 JASPAR yes 118431896
chr1 201472842 201472851 POU3F4 JASPAR yes 34499405
chr1 201472842 201472851 POU5F1B JASPAR yes 34499406
chr1 201472842 201472851 POU3F4 JASPAR yes 118431897
chr1 201472842 201472851 POU5F1B JASPAR yes 118431898
chr1 201472843 201472859 SRF JASPAR yes 34499407
chr1 201472843 201472859 SRF JASPAR yes 118431899
chr1 201472849 201472853 TEAD2 TRANSFAC yes 34499408
chr1 201472849 201472853 TEAD2 TRANSFAC yes 118431900
chr1 201472849 201472854 TBP TRANSFAC yes 34499409
chr1 201472849 201472854 TBP TRANSFAC yes 118431901
chr1 201472849 201472855 TMF TRANSFAC yes 34499410
chr1 201472849 201472855 TMF TRANSFAC yes 118431902
chr1 201472870 201472880 MYF6 JASPAR yes 34499411
chr1 201472870 201472880 MYF6 JASPAR yes 118431903
chr1 201472877 201472898 REST JASPAR yes 34499412
chr1 201472877 201472898 REST JASPAR yes 118431904
chr1 201472885 201472903 RARA JASPAR yes 34499413
chr1 201472885 201472903 RARA JASPAR yes 118431905
chr1 201472891 201472897 SP1 TRANSFAC yes 34499414
chr1 201472891 201472897 SP1 TRANSFAC yes 118431906
chr1 201472891 201472912 ZNF263 JASPAR yes 34499415
chr1 201472891 201472912 ZNF263 JASPAR yes 118431907
chr1 201472901 201472922 ZNF263 JASPAR yes 34499416
chr1 201472901 201472922 ZNF263 JASPAR yes 118431908
chr1 201472930 201472951 IRF1 JASPAR yes 34499417
chr1 201472930 201472951 IRF1 JASPAR yes 118431909
chr1 201472932 201472947 PRDM1 JASPAR yes 34499418
chr1 201472932 201472947 PRDM1 JASPAR yes 118431910
chr1 201472940 201472960 TP53 JASPAR yes 34499419
chr1 201472940 201472960 TP53 JASPAR yes 118431911
chr1 201472956 201472976 TP53 JASPAR yes 34499420
chr1 201472956 201472976 TP53 JASPAR yes 118431912
chr1 201472958 201472965 NFATC2 JASPAR yes 34499421
chr1 201472958 201472965 NFATC2 JASPAR yes 118431913
chr1 201472966 201472981 FOXP1 JASPAR yes 34499422
chr1 201472966 201472981 FOXP1 JASPAR yes 118431914
chr1 201472967 201472978 FOXP2 JASPAR yes 34499423
chr1 201472967 201472978 FOXP2 JASPAR yes 118431915
chr1 201472967 201472979 FOXC2 JASPAR yes 34499424
chr1 201472967 201472979 FOXC2 JASPAR yes 118431916
chr1 201472968 201472979 FOXC1 JASPAR yes 34499425
chr1 201472968 201472979 FOXC1 JASPAR yes 118431917
chr1 201472969 201472980 FOXA1 JASPAR yes 34499426
chr1 201472969 201472980 FOXA1 JASPAR yes 118431918
chr1 201472993 201473007 IRF8 JASPAR yes 34499427
chr1 201472993 201473007 IRF8 JASPAR yes 118431919
chr1 201472995 201473007 IRF1 JASPAR yes 34499428
chr1 201472995 201473007 IRF1 JASPAR yes 118431920
SNP sites on vista4555[chr1:201472589-201472996]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 201472605 rs527262570 G A,C,T
GLIS1 INSM1 POLR2A
854329
chr1 201472642 rs188783082 T C
EP300 JUN MSC POLR2A
854330
chr1 201472758 rs116406439 G A
CEBPB EP300 FOXA1 FOXB1 FOXC1 JUN POLR2A SRF YY1
854331
chr1 201472857 rs186562326 T G
CEBPB EP300 FOXA1 JUN POLR2A SRF
854332
chr1 201472886 rs3767532 C G,T
CEBPB EP300 FOXA1 JUN POLR2A RARA REST
854333
chr1 201472907 rs115693212 T C
CEBPB EP300 FOXA1 JUN POLR2A ZNF263
854334
chr1 201472954 rs592865 C G,T
EP300 JUN POLR2A TP53
854335
chr1 201472971 rs568796 G C
EP300 FOXA1 FOXC1 FOXC2 FOXP1 FOXP2 JUN POLR2A TP53
854336
chr1 201472975 rs3767529 T G
EP300 FOXA1 FOXC1 FOXC2 FOXP1 FOXP2 JUN POLR2A TP53
854337
Genes possibly regulated by vista4555[chr1:201472589-201472996]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 201373625 201398994 - TNNI1 ENSG00000159173.14 201398994 0.98 0.97 1706 26405
chr1 201434620 201438365 - PHLDA3 ENSG00000174307.5 201438365 0.73 1.0 1707 65776
chr1 201452658 201478584 - CSRP1 ENSG00000159176.9 201478584 0.86 0.99 1708 94412
Expression level of Genes
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miRNAs possibly regulated by vista4555[chr1:201472589-201472996]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results