EnhancerDB
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  3. rs3767529[chr1:201472975]
Enhancers that have rs3767529[chr1:201472975]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201463125 201475335 enh12520
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr1 201472589 201472996 vista4555
VISTA
Transcript factors that have rs3767529[chr1:201472975]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201472386 201473036 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856480
chr1 201472419 201473672 POLR2A UCSC Txn Factor no Conserved 107856482
chr1 201472497 201473013 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856489
chr1 201472524 201473000 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856491
chr1 201472534 201473074 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107856494
chr1 201472556 201473040 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107856497
chr1 201472560 201473060 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107856498
chr1 201472560 201473064 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856499
chr1 201472562 201473006 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107856501
chr1 201472571 201473011 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21364408
chr1 201472571 201473011 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107856502
chr1 201472611 201473007 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856506
chr1 201472618 201473255 EP300 UCSC Txn Factor no Conserved 107856509
chr1 201472624 201472984 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21364410
chr1 201472624 201472984 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107856510
chr1 201472625 201472987 JUN UCSC Txn Factor no Conserved 107856512
chr1 201472625 201473001 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856513
chr1 201472628 201472998 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856514
chr1 201472632 201472976 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856515
chr1 201472647 201472987 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856522
chr1 201472656 201473032 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107856526
chr1 201472658 201473018 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856528
chr1 201472661 201473137 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856529
chr1 201472690 201473014 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107856533
chr1 201472699 201473009 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107856536
chr1 201472715 201473255 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107856541
chr1 201472956 201472976 TP53 JASPAR yes 34499420
chr1 201472956 201472976 TP53 JASPAR yes 118431912
chr1 201472966 201472981 FOXP1 JASPAR yes 34499422
chr1 201472966 201472981 FOXP1 JASPAR yes 118431914
chr1 201472967 201472978 FOXP2 JASPAR yes 34499423
chr1 201472967 201472978 FOXP2 JASPAR yes 118431915
chr1 201472967 201472979 FOXC2 JASPAR yes 34499424
chr1 201472967 201472979 FOXC2 JASPAR yes 118431916
chr1 201472968 201472979 FOXC1 JASPAR yes 34499425
chr1 201472968 201472979 FOXC1 JASPAR yes 118431917
chr1 201472969 201472980 FOXA1 JASPAR yes 34499426
chr1 201472969 201472980 FOXA1 JASPAR yes 118431918
Genes associated with rs3767529[chr1:201472975], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 202317827 202561834 + PPP1R12B ENSG00000077157.16 202317827 844852 Esophagus 0.29094 1722