EnhancerDB
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  3. vista45553[chr4:105980538-105980953]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45553[chr4:105980538-105980953]
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Tissue distribution of vista45553
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Transcription factor that possibly regulate vista45553[chr4:105980538-105980953]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 105980501 105980933 NFIC UCSC Txn Factor no Conserved 108533199
chr4 105980546 105980843 ATF2 UCSC Txn Factor no Conserved 108533200
chr4 105980564 105980902 RUNX3 UCSC Txn Factor no Conserved 108533201
chr4 105980577 105980801 BATF UCSC Txn Factor no Conserved 108533202
chr4 105980591 105980846 SPI1 UCSC Txn Factor no Conserved 108533203
chr4 105980533 105980548 LEF1 JASPAR yes 49266121
chr4 105980533 105980548 LEF1 JASPAR yes 91795850
chr4 105980534 105980549 PRDM1 JASPAR yes 49266122
chr4 105980534 105980549 PRDM1 JASPAR yes 91795851
chr4 105980537 105980558 ZNF263 JASPAR yes 49266123
chr4 105980537 105980558 ZNF263 JASPAR yes 91795852
chr4 105980603 105980620 RXRA JASPAR yes 49266124
chr4 105980603 105980620 RXRA JASPAR yes 91795853
chr4 105980621 105980631 CLOCK JASPAR yes 49266125
chr4 105980621 105980631 MYF6 JASPAR yes 49266126
chr4 105980621 105980631 CLOCK JASPAR yes 91795854
chr4 105980621 105980631 MYF6 JASPAR yes 91795855
chr4 105980638 105980654 POU4F2 JASPAR yes 49266127
chr4 105980638 105980654 POU4F3 JASPAR yes 49266128
chr4 105980638 105980654 POU4F2 JASPAR yes 91795856
chr4 105980638 105980654 POU4F3 JASPAR yes 91795857
chr4 105980640 105980654 POU4F1 JASPAR yes 49266129
chr4 105980640 105980654 POU4F1 JASPAR yes 91795858
chr4 105980651 105980662 JUNB JASPAR yes 49266130
chr4 105980651 105980662 JUNB JASPAR yes 91795859
chr4 105980652 105980663 FOS JASPAR yes 49266131
chr4 105980652 105980663 FOSL1 JASPAR yes 49266132
chr4 105980652 105980663 FOS JASPAR yes 91795860
chr4 105980652 105980663 FOSL1 JASPAR yes 91795861
chr4 105980654 105980660 JUN TRANSFAC yes 49266133
chr4 105980654 105980660 JUN TRANSFAC yes 91795862
chr4 105980665 105980676 BATF JASPAR yes 49266134
chr4 105980665 105980676 BATF JASPAR yes 91795863
chr4 105980670 105980674 YY1 TRANSFAC yes 49266135
chr4 105980670 105980674 YY1 TRANSFAC yes 91795864
chr4 105980672 105980678 TCF4 TRANSFAC yes 49266136
chr4 105980672 105980678 TCF4 TRANSFAC yes 91795865
chr4 105980703 105980724 ZNF263 JASPAR yes 49266137
chr4 105980703 105980724 ZNF263 JASPAR yes 91795866
chr4 105980706 105980727 IRF1 JASPAR yes 49266138
chr4 105980706 105980727 IRF1 JASPAR yes 91795867
chr4 105980709 105980730 ZNF263 JASPAR yes 49266139
chr4 105980709 105980730 ZNF263 JASPAR yes 91795868
chr4 105980710 105980725 PRDM1 JASPAR yes 49266140
chr4 105980710 105980725 PRDM1 JASPAR yes 91795869
chr4 105980712 105980733 IRF1 JASPAR yes 49266141
chr4 105980712 105980733 IRF1 JASPAR yes 91795870
chr4 105980716 105980730 SPI1 JASPAR yes 49266142
chr4 105980716 105980730 SPI1 JASPAR yes 91795871
chr4 105980748 105980762 PLAG1 JASPAR yes 49266143
chr4 105980748 105980762 PLAG1 JASPAR yes 91795872
chr4 105980749 105980754 SP1 TRANSFAC yes 49266144
chr4 105980749 105980754 SP1 TRANSFAC yes 91795873
chr4 105980751 105980772 ZNF263 JASPAR yes 49266145
chr4 105980751 105980772 ZNF263 JASPAR yes 91795874
chr4 105980757 105980762 TFAP2A TRANSFAC yes 49266146
chr4 105980757 105980762 TFAP2A TRANSFAC yes 91795875
chr4 105980757 105980763 MZF1 JASPAR yes 49266147
chr4 105980757 105980763 MZF1 JASPAR yes 91795876
chr4 105980786 105980792 JUN TRANSFAC yes 49266148
chr4 105980786 105980792 JUN TRANSFAC yes 91795877
chr4 105980794 105980809 HSF1 JASPAR yes 49266149
chr4 105980794 105980809 HSF1 JASPAR yes 91795878
chr4 105980795 105980808 HSF1 JASPAR yes 49266150
chr4 105980795 105980808 HSF2 JASPAR yes 49266151
chr4 105980795 105980808 HSF4 JASPAR yes 49266152
chr4 105980795 105980808 HSF1 JASPAR yes 91795879
chr4 105980795 105980808 HSF2 JASPAR yes 91795880
chr4 105980795 105980808 HSF4 JASPAR yes 91795881
chr4 105980799 105980810 STAT3 JASPAR yes 49266153
chr4 105980799 105980810 STAT3 JASPAR yes 91795882
chr4 105980820 105980834 BATF3 JASPAR yes 49266154
chr4 105980820 105980834 BATF3 JASPAR yes 91795883
chr4 105980831 105980842 FLI1 JASPAR yes 49266155
chr4 105980831 105980842 FLI1 JASPAR yes 91795884
chr4 105980832 105980842 GABPA JASPAR yes 49266156
chr4 105980832 105980842 GABPA JASPAR yes 91795885
chr4 105980832 105980844 ELF4 JASPAR yes 49266157
chr4 105980832 105980844 ELF4 JASPAR yes 91795886
chr4 105980832 105980845 ELF1 JASPAR yes 49266158
chr4 105980832 105980845 ELF1 JASPAR yes 91795887
chr4 105980832 105980846 SPI1 JASPAR yes 49266159
chr4 105980832 105980846 SPI1 JASPAR yes 91795888
chr4 105980833 105980841 EHF JASPAR yes 49266160
chr4 105980833 105980841 EHF JASPAR yes 91795889
chr4 105980853 105980861 EHF JASPAR yes 49266161
chr4 105980853 105980861 EHF JASPAR yes 91795890
chr4 105980855 105980860 ETS2 TRANSFAC yes 49266162
chr4 105980855 105980860 ETS2 TRANSFAC yes 91795891
chr4 105980862 105980873 DUX4 JASPAR yes 49266163
chr4 105980862 105980873 DUX4 JASPAR yes 91795892
chr4 105980869 105980880 HOXA10 JASPAR yes 49266164
chr4 105980869 105980880 HOXA10 JASPAR yes 91795893
chr4 105980870 105980880 ALX3 JASPAR yes 49266165
chr4 105980870 105980880 GSX2 JASPAR yes 49266166
chr4 105980870 105980880 HOXB2 JASPAR yes 49266167
chr4 105980870 105980880 MNX1 JASPAR yes 49266168
chr4 105980870 105980880 ALX3 JASPAR yes 91795894
chr4 105980870 105980880 GSX2 JASPAR yes 91795895
chr4 105980870 105980880 HOXB2 JASPAR yes 91795896
chr4 105980870 105980880 MNX1 JASPAR yes 91795897
chr4 105980871 105980879 LMX1A JASPAR yes 49266169
chr4 105980871 105980879 LMX1B JASPAR yes 49266170
chr4 105980871 105980879 NKX6-1 JASPAR yes 49266171
chr4 105980871 105980879 NKX6-2 JASPAR yes 49266172
chr4 105980871 105980879 VAX1 JASPAR yes 49266173
chr4 105980871 105980879 VAX2 JASPAR yes 49266174
chr4 105980871 105980879 VSX1 JASPAR yes 49266175
chr4 105980871 105980879 VSX2 JASPAR yes 49266176
chr4 105980871 105980879 LMX1A JASPAR yes 91795898
chr4 105980871 105980879 LMX1B JASPAR yes 91795899
chr4 105980871 105980879 NKX6-1 JASPAR yes 91795900
chr4 105980871 105980879 NKX6-2 JASPAR yes 91795901
chr4 105980871 105980879 VAX1 JASPAR yes 91795902
chr4 105980871 105980879 VAX2 JASPAR yes 91795903
chr4 105980871 105980879 VSX1 JASPAR yes 91795904
chr4 105980871 105980879 VSX2 JASPAR yes 91795905
chr4 105980871 105980881 POU6F2 JASPAR yes 49266177
chr4 105980871 105980881 POU6F2 JASPAR yes 91795906
chr4 105980884 105980892 MEIS2 JASPAR yes 49266178
chr4 105980884 105980892 MEIS3 JASPAR yes 49266179
chr4 105980884 105980892 MEIS2 JASPAR yes 91795907
chr4 105980884 105980892 MEIS3 JASPAR yes 91795908
chr4 105980885 105980889 NFE TRANSFAC yes 49266180
chr4 105980885 105980889 NFE TRANSFAC yes 91795909
chr4 105980885 105980896 CDX2 JASPAR yes 49266181
chr4 105980885 105980896 CDX2 JASPAR yes 91795910
chr4 105980886 105980897 HOXA10 JASPAR yes 49266182
chr4 105980886 105980897 HOXC11 JASPAR yes 49266183
chr4 105980886 105980897 HOXC12 JASPAR yes 49266184
chr4 105980886 105980897 HOXC13 JASPAR yes 49266185
chr4 105980886 105980897 HOXD12 JASPAR yes 49266186
chr4 105980886 105980897 HOXA10 JASPAR yes 91795911
chr4 105980886 105980897 HOXC11 JASPAR yes 91795912
chr4 105980886 105980897 HOXC12 JASPAR yes 91795913
chr4 105980886 105980897 HOXC13 JASPAR yes 91795914
chr4 105980886 105980897 HOXD12 JASPAR yes 91795915
chr4 105980887 105980896 CDX1 JASPAR yes 49266187
chr4 105980887 105980896 CDX1 JASPAR yes 91795916
chr4 105980887 105980897 HOXC10 JASPAR yes 49266188
chr4 105980887 105980897 HOXD11 JASPAR yes 49266189
chr4 105980887 105980897 HOXD13 JASPAR yes 49266190
chr4 105980887 105980897 HOXC10 JASPAR yes 91795917
chr4 105980887 105980897 HOXD11 JASPAR yes 91795918
chr4 105980887 105980897 HOXD13 JASPAR yes 91795919
chr4 105980892 105980908 SOX8 JASPAR yes 49266191
chr4 105980892 105980908 SOX8 JASPAR yes 91795920
chr4 105980905 105980920 LEF1 JASPAR yes 49266192
chr4 105980905 105980920 LEF1 JASPAR yes 91795921
chr4 105980906 105980920 TCF7L2 JASPAR yes 49266193
chr4 105980906 105980920 TCF7L2 JASPAR yes 91795922
chr4 105980909 105980915 LEF1 TRANSFAC yes 49266194
chr4 105980909 105980915 SOX10 JASPAR yes 49266195
chr4 105980909 105980915 LEF1 TRANSFAC yes 91795923
chr4 105980909 105980915 SOX10 JASPAR yes 91795924
chr4 105980910 105980922 FOXC2 JASPAR yes 49266196
chr4 105980910 105980922 FOXC2 JASPAR yes 91795925
chr4 105980922 105980934 PROX1 JASPAR yes 49266197
chr4 105980922 105980934 PROX1 JASPAR yes 91795926
chr4 105980941 105980956 FOXP1 JASPAR yes 49266198
chr4 105980941 105980956 FOXP1 JASPAR yes 91795927
chr4 105980949 105980963 POU4F1 JASPAR yes 49266199
chr4 105980949 105980963 POU4F1 JASPAR yes 91795928
SNP sites on vista45553[chr4:105980538-105980953]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 105980618 rs76435449 C T
ATF2 BATF NFIC RUNX3 RXRA SPI1
7727850
chr4 105980621 rs36046743 G A,C
ATF2 BATF CLOCK MYF6 NFIC RUNX3 SPI1
7727851
chr4 105980642 rs529336618 A G
ATF2 BATF NFIC POU4F1 POU4F2 POU4F3 RUNX3 SPI1
7727852
chr4 105980644 rs35619458 A G
ATF2 BATF NFIC POU4F1 POU4F2 POU4F3 RUNX3 SPI1
7727853
chr4 105980800 rs151013740 A G
ATF2 BATF HSF1 HSF2 HSF4 NFIC RUNX3 SPI1 STAT3
7727854
chr4 105980927 rs13117794 A G
NFIC PROX1
7727855
Genes possibly regulated by vista45553[chr4:105980538-105980953]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 106067032 106200973 + TET2 ENSG00000168769.8 106067032 0.8 0.99 4919 13921
Expression level of Genes
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miRNAs possibly regulated by vista45553[chr4:105980538-105980953]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results