EnhancerDB
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  3. rs529336618[chr4:105980642]
Enhancers that have rs529336618[chr4:105980642]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 105977277 105985175 enh21721
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Epithelial (MCF-7)
chr4 105980538 105980953 vista45553
VISTA
Transcript factors that have rs529336618[chr4:105980642]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 105980501 105980933 NFIC UCSC Txn Factor no Conserved 108533199
chr4 105980546 105980843 ATF2 UCSC Txn Factor no Conserved 108533200
chr4 105980564 105980902 RUNX3 UCSC Txn Factor no Conserved 108533201
chr4 105980577 105980801 BATF UCSC Txn Factor no Conserved 108533202
chr4 105980591 105980846 SPI1 UCSC Txn Factor no Conserved 108533203
chr4 105980638 105980654 POU4F2 JASPAR yes 49266127
chr4 105980638 105980654 POU4F3 JASPAR yes 49266128
chr4 105980638 105980654 POU4F2 JASPAR yes 91795856
chr4 105980638 105980654 POU4F3 JASPAR yes 91795857
chr4 105980640 105980654 POU4F1 JASPAR yes 49266129
chr4 105980640 105980654 POU4F1 JASPAR yes 91795858
Genes associated with rs529336618[chr4:105980642], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More